Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Shank1D3YZU1 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Shank1D3YZU1 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shank1D3YZU1 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Shank1D3YZU1 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.71□□□□□ -0.53
Shank1D3YZU1 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Shank1D3YZU1 Gm14109-201ENSMUST00000118814 309 ntBASIC11.71□□□□□ -0.53
Shank1D3YZU1 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Shank1D3YZU1 Gm5523-201ENSMUST00000180415 997 ntBASIC11.71□□□□□ -0.53
Shank1D3YZU1 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Shank1D3YZU1 Gm3096-201ENSMUST00000185770 364 ntBASIC11.71□□□□□ -0.53
Shank1D3YZU1 Gm28450-201ENSMUST00000187349 638 ntBASIC11.71□□□□□ -0.53
Shank1D3YZU1 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shank1D3YZU1 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.71□□□□□ -0.53
Shank1D3YZU1 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shank1D3YZU1 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Shank1D3YZU1 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shank1D3YZU1 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shank1D3YZU1 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shank1D3YZU1 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shank1D3YZU1 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shank1D3YZU1 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.71□□□□□ -0.53
Shank1D3YZU1 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shank1D3YZU1 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Shank1D3YZU1 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Shank1D3YZU1 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shank1D3YZU1 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shank1D3YZU1 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Shank1D3YZU1 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Shank1D3YZU1 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Shank1D3YZU1 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Shank1D3YZU1 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shank1D3YZU1 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Shank1D3YZU1 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shank1D3YZU1 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.71□□□□□ -0.54
Shank1D3YZU1 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Shank1D3YZU1 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shank1D3YZU1 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shank1D3YZU1 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shank1D3YZU1 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shank1D3YZU1 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shank1D3YZU1 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.71□□□□□ -0.54
Shank1D3YZU1 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.54
Shank1D3YZU1 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.71□□□□□ -0.54
Shank1D3YZU1 Gm13097-201ENSMUST00000210722 397 ntBASIC11.71□□□□□ -0.54
Shank1D3YZU1 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.71□□□□□ -0.54
Shank1D3YZU1 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.71□□□□□ -0.54
Shank1D3YZU1 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shank1D3YZU1 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.71□□□□□ -0.54
Shank1D3YZU1 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shank1D3YZU1 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shank1D3YZU1 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Shank1D3YZU1 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shank1D3YZU1 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shank1D3YZU1 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.71□□□□□ -0.54
Shank1D3YZU1 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shank1D3YZU1 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Gm7593-201ENSMUST00000187246 644 ntBASIC11.7□□□□□ -0.54
Shank1D3YZU1 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shank1D3YZU1 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 103.7 ms