Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Gm5939-201ENSMUST00000119613 2874 ntBASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Gm10176-201ENSMUST00000159707 2264 ntBASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Gm6161-201ENSMUST00000121942 1102 ntBASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Gm15429-201ENSMUST00000151268 798 ntBASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Gm6254-201ENSMUST00000168178 1072 ntBASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Gm6153-201ENSMUST00000172004 1058 ntBASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Mir7221-201ENSMUST00000184009 72 ntBASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Mir7654-201ENSMUST00000185082 70 ntBASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Gm5641-202ENSMUST00000198699 1080 ntBASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Gm7446-201ENSMUST00000221035 1240 ntBASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 AC238811.3-201ENSMUST00000225422 709 ntBASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 CT573086.1-201ENSMUST00000227202 1074 ntBASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Gm15823-201ENSMUST00000064305 670 ntBASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC9.5□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC9.5□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC9.5□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav9n-2A0A0G2JDP3 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms