Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 AC122860.2-201ENSMUST00000217967 2671 ntBASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm12585-201ENSMUST00000117307 290 ntBASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm15393-201ENSMUST00000120499 219 ntBASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Mir7684-201ENSMUST00000183858 60 ntBASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm10576-201ENSMUST00000191927 825 ntBASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm6916-202ENSMUST00000205523 195 ntBASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Trav6n-6A0A075B6B2 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav6n-6A0A075B6B2 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav6n-6A0A075B6B2 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Trav6n-6A0A075B6B2 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC9.77□□□□□ -0.84
Trav6n-6A0A075B6B2 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC9.77□□□□□ -0.84
Trav6n-6A0A075B6B2 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav6n-6A0A075B6B2 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Trav6n-6A0A075B6B2 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm4804-201ENSMUST00000182234 999 ntBASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm27306-201ENSMUST00000183970 107 ntBASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Adra1a-206ENSMUST00000225182 2337 ntBASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 AC241621.2-201ENSMUST00000223991 2151 ntBASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav6n-6A0A075B6B2 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav6n-6A0A075B6B2 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms