Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gm5559-201ENSMUST00000180755 1002 ntBASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Gm4335-201ENSMUST00000182581 1004 ntBASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Gm28760-201ENSMUST00000185995 736 ntBASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Gm5161-201ENSMUST00000075243 853 ntBASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Gm24447-201ENSMUST00000083977 338 ntBASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Gm27194-201ENSMUST00000175753 2936 ntBASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Gm24694-201ENSMUST00000180054 110 ntBASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Gm27663-201ENSMUST00000184839 110 ntBASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Gm17870-201ENSMUST00000219489 1174 ntBASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trav5-4A0A075B652 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Mir7023-201ENSMUST00000185093 64 ntBASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Syt7-204ENSMUST00000223586 1344 ntBASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.97□□□□□ -0.65
Trav5-4A0A075B652 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms