Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf3Q9QXK7 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf3Q9QXK7 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf3Q9QXK7 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 Gm27514-201ENSMUST00000183692 110 ntBASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf3Q9QXK7 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Mir686-201ENSMUST00000102174 109 ntBASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Gm12957-201ENSMUST00000117835 377 ntBASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Gm37424-201ENSMUST00000191727 561 ntBASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.06□□□□□ -0.16
Cpsf3Q9QXK7 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf3Q9QXK7 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf3Q9QXK7 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf3Q9QXK7 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.05□□□□□ -0.16
Cpsf3Q9QXK7 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.05□□□□□ -0.16
Cpsf3Q9QXK7 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf3Q9QXK7 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf3Q9QXK7 Grk6-205ENSMUST00000224653 2976 ntBASIC14.05□□□□□ -0.16
Cpsf3Q9QXK7 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf3Q9QXK7 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf3Q9QXK7 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf3Q9QXK7 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf3Q9QXK7 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.05□□□□□ -0.16
Cpsf3Q9QXK7 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf3Q9QXK7 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf3Q9QXK7 Snora73a-201ENSMUST00000082453 205 ntBASIC14.05□□□□□ -0.16
Cpsf3Q9QXK7 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cpsf3Q9QXK7 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf3Q9QXK7 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.05□□□□□ -0.16
Cpsf3Q9QXK7 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cpsf3Q9QXK7 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Cpsf3Q9QXK7 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf3Q9QXK7 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf3Q9QXK7 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf3Q9QXK7 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms