Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm18734-201ENSMUST00000172937 808 ntBASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Gm38092-201ENSMUST00000195600 653 ntBASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Gm17812-201ENSMUST00000204935 318 ntBASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Gm44551-201ENSMUST00000208804 171 ntBASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Gm45925-201ENSMUST00000218882 744 ntBASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Nkx2-4Q9EQM3 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Gm45219-201ENSMUST00000205602 465 ntBASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Ntng1-201ENSMUST00000051253 327 ntBASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Nkx2-4Q9EQM3 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nkx2-4Q9EQM3 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 108.1 ms