Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Dcpp3-201ENSMUST00000115428 610 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Gm16044-201ENSMUST00000118475 450 ntBASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Ctcflos-203ENSMUST00000144256 1237 ntTSL 5 BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Gm44397-201ENSMUST00000195950 113 ntBASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Gm44958-201ENSMUST00000203734 736 ntBASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Gm5035-201ENSMUST00000215581 927 ntBASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Clec12b-202ENSMUST00000112082 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Gm12742-201ENSMUST00000117326 410 ntBASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Gm27892-201ENSMUST00000185017 106 ntBASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Gm6007-201ENSMUST00000208170 823 ntBASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 AC153932.1-201ENSMUST00000218558 787 ntBASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Gm5356-201ENSMUST00000093326 615 ntBASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retreg3Q9CQV4 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Retreg3Q9CQV4 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.4□□□□□ -0.27
Retreg3Q9CQV4 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.39□□□□□ -0.27
Retreg3Q9CQV4 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retreg3Q9CQV4 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retreg3Q9CQV4 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retreg3Q9CQV4 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retreg3Q9CQV4 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Retreg3Q9CQV4 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retreg3Q9CQV4 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retreg3Q9CQV4 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retreg3Q9CQV4 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retreg3Q9CQV4 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retreg3Q9CQV4 E130114P18Rik-201ENSMUST00000107067 1092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retreg3Q9CQV4 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.39□□□□□ -0.27
Retreg3Q9CQV4 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms