Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim8Q99PJ2 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Gm18905-201ENSMUST00000205454 928 ntBASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Gm7775-201ENSMUST00000218871 853 ntBASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim8Q99PJ2 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Mir7221-201ENSMUST00000184009 72 ntBASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim8Q99PJ2 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim8Q99PJ2 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim8Q99PJ2 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim8Q99PJ2 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim8Q99PJ2 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim8Q99PJ2 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.84□□□□□ -0.35
Trim8Q99PJ2 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim8Q99PJ2 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim8Q99PJ2 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim8Q99PJ2 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms