Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Cdk5rap3Q99LM2 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cdk5rap3Q99LM2 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cdk5rap3Q99LM2 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Cdk5rap3Q99LM2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cdk5rap3Q99LM2 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.58□□□□□ -0.23
Cdk5rap3Q99LM2 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cdk5rap3Q99LM2 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.58□□□□□ -0.23
Cdk5rap3Q99LM2 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Gm14719-201ENSMUST00000121891 340 ntBASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Gm42550-201ENSMUST00000201553 960 ntBASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdk5rap3Q99LM2 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdk5rap3Q99LM2 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Gm15321-201ENSMUST00000121290 288 ntBASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap3Q99LM2 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms