Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.68□□□□□ -0.38
Vmp1Q99KU0 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vmp1Q99KU0 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.68□□□□□ -0.38
Vmp1Q99KU0 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vmp1Q99KU0 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vmp1Q99KU0 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vmp1Q99KU0 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vmp1Q99KU0 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Vmp1Q99KU0 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vmp1Q99KU0 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vmp1Q99KU0 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Vmp1Q99KU0 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Gm12485-201ENSMUST00000119641 291 ntBASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.67□□□□□ -0.38
Vmp1Q99KU0 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vmp1Q99KU0 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Mir7654-201ENSMUST00000185082 70 ntBASIC12.66□□□□□ -0.38
Vmp1Q99KU0 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.66□□□□□ -0.38
Vmp1Q99KU0 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Gm9908-201ENSMUST00000211534 448 ntBASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Vmp1Q99KU0 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vmp1Q99KU0 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vmp1Q99KU0 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vmp1Q99KU0 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vmp1Q99KU0 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vmp1Q99KU0 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Vmp1Q99KU0 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.65□□□□□ -0.38
Vmp1Q99KU0 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms