Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.21□□□□□ -0.29
Cdk9Q99J95 Gm22175-201ENSMUST00000175007 78 ntBASIC13.21□□□□□ -0.29
Cdk9Q99J95 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.21□□□□□ -0.29
Cdk9Q99J95 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk9Q99J95 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Cdk9Q99J95 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk9Q99J95 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk9Q99J95 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.21□□□□□ -0.29
Cdk9Q99J95 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk9Q99J95 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk9Q99J95 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Cdk9Q99J95 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk9Q99J95 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdk9Q99J95 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cdk9Q99J95 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Cdk9Q99J95 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk9Q99J95 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Cdk9Q99J95 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk9Q99J95 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cdk9Q99J95 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk9Q99J95 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cdk9Q99J95 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk9Q99J95 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk9Q99J95 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.2□□□□□ -0.3
Cdk9Q99J95 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk9Q99J95 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.2□□□□□ -0.3
Cdk9Q99J95 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk9Q99J95 Gm15460-201ENSMUST00000118147 391 ntBASIC13.2□□□□□ -0.3
Cdk9Q99J95 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.2□□□□□ -0.3
Cdk9Q99J95 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.2□□□□□ -0.3
Cdk9Q99J95 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.2□□□□□ -0.3
Cdk9Q99J95 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.2□□□□□ -0.3
Cdk9Q99J95 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Cdk9Q99J95 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk9Q99J95 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk9Q99J95 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.2□□□□□ -0.3
Cdk9Q99J95 Gm5779-201ENSMUST00000218467 910 ntBASIC13.2□□□□□ -0.3
Cdk9Q99J95 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk9Q99J95 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Cdk9Q99J95 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk9Q99J95 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk9Q99J95 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.2□□□□□ -0.3
Cdk9Q99J95 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk9Q99J95 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cdk9Q99J95 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cdk9Q99J95 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk9Q99J95 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cdk9Q99J95 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk9Q99J95 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk9Q99J95 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk9Q99J95 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.19□□□□□ -0.3
Cdk9Q99J95 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk9Q99J95 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.19□□□□□ -0.3
Cdk9Q99J95 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Gm13385-201ENSMUST00000121089 220 ntBASIC13.19□□□□□ -0.3
Cdk9Q99J95 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cdk9Q99J95 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.19□□□□□ -0.3
Cdk9Q99J95 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.19□□□□□ -0.3
Cdk9Q99J95 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk9Q99J95 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms