Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm17150-201ENSMUST00000165577 381 ntBASIC13.72□□□□□ -0.21
Pcdha3Q91Y16 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Pcdha3Q91Y16 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha3Q91Y16 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha3Q91Y16 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.72□□□□□ -0.21
Pcdha3Q91Y16 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha3Q91Y16 Gm16372-201ENSMUST00000073088 450 ntBASIC13.72□□□□□ -0.21
Pcdha3Q91Y16 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.72□□□□□ -0.21
Pcdha3Q91Y16 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Pcdha3Q91Y16 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.72□□□□□ -0.21
Pcdha3Q91Y16 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha3Q91Y16 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha3Q91Y16 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.72□□□□□ -0.21
Pcdha3Q91Y16 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha3Q91Y16 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.72□□□□□ -0.21
Pcdha3Q91Y16 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha3Q91Y16 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha3Q91Y16 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Pcdha3Q91Y16 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha3Q91Y16 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha3Q91Y16 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.72□□□□□ -0.21
Pcdha3Q91Y16 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha3Q91Y16 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha3Q91Y16 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha3Q91Y16 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha3Q91Y16 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha3Q91Y16 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.71□□□□□ -0.21
Pcdha3Q91Y16 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.21
Pcdha3Q91Y16 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha3Q91Y16 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.71□□□□□ -0.21
Pcdha3Q91Y16 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha3Q91Y16 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha3Q91Y16 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha3Q91Y16 Mir874-201ENSMUST00000104769 76 ntBASIC13.71□□□□□ -0.21
Pcdha3Q91Y16 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha3Q91Y16 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.71□□□□□ -0.21
Pcdha3Q91Y16 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Pcdha3Q91Y16 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.71□□□□□ -0.21
Pcdha3Q91Y16 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.71□□□□□ -0.21
Pcdha3Q91Y16 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha3Q91Y16 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha3Q91Y16 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha3Q91Y16 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha3Q91Y16 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha3Q91Y16 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha3Q91Y16 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha3Q91Y16 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha3Q91Y16 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha3Q91Y16 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdha3Q91Y16 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.71□□□□□ -0.22
Pcdha3Q91Y16 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdha3Q91Y16 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Pcdha3Q91Y16 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdha3Q91Y16 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdha3Q91Y16 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Gm8213-201ENSMUST00000118191 441 ntBASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdha3Q91Y16 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms