Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm8343-201ENSMUST00000182705 994 ntBASIC15.16■□□□□ 0.02
StrcQ8VIM6 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC15.16■□□□□ 0.02
StrcQ8VIM6 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
StrcQ8VIM6 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC15.16■□□□□ 0.02
StrcQ8VIM6 AC151275.1-201ENSMUST00000224870 585 ntBASIC15.16■□□□□ 0.02
StrcQ8VIM6 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
StrcQ8VIM6 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
StrcQ8VIM6 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
StrcQ8VIM6 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
StrcQ8VIM6 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
StrcQ8VIM6 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC15.15■□□□□ 0.02
StrcQ8VIM6 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
StrcQ8VIM6 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
StrcQ8VIM6 Gm43184-201ENSMUST00000197247 542 ntBASIC15.15■□□□□ 0.02
StrcQ8VIM6 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC15.15■□□□□ 0.02
StrcQ8VIM6 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC15.15■□□□□ 0.02
StrcQ8VIM6 Gm45120-201ENSMUST00000208880 408 ntBASIC15.15■□□□□ 0.02
StrcQ8VIM6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
StrcQ8VIM6 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
StrcQ8VIM6 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
StrcQ8VIM6 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
StrcQ8VIM6 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC15.15■□□□□ 0.02
StrcQ8VIM6 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
StrcQ8VIM6 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.15■□□□□ 0.02
StrcQ8VIM6 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
StrcQ8VIM6 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
StrcQ8VIM6 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
StrcQ8VIM6 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC15.15■□□□□ 0.02
StrcQ8VIM6 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
StrcQ8VIM6 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
StrcQ8VIM6 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
StrcQ8VIM6 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
StrcQ8VIM6 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
StrcQ8VIM6 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
StrcQ8VIM6 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
StrcQ8VIM6 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC15.15■□□□□ 0.02
StrcQ8VIM6 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
StrcQ8VIM6 Mirlet7i-201ENSMUST00000083472 85 ntBASIC15.15■□□□□ 0.02
StrcQ8VIM6 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
StrcQ8VIM6 Gm9129-201ENSMUST00000218173 1689 ntBASIC15.15■□□□□ 0.02
StrcQ8VIM6 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
StrcQ8VIM6 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
StrcQ8VIM6 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC15.15■□□□□ 0.02
StrcQ8VIM6 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
StrcQ8VIM6 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
StrcQ8VIM6 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
StrcQ8VIM6 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
StrcQ8VIM6 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
StrcQ8VIM6 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
StrcQ8VIM6 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
StrcQ8VIM6 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
StrcQ8VIM6 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
StrcQ8VIM6 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
StrcQ8VIM6 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
StrcQ8VIM6 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
StrcQ8VIM6 Gm15725-201ENSMUST00000119947 1090 ntBASIC15.14■□□□□ 0.01
StrcQ8VIM6 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC15.14■□□□□ 0.01
StrcQ8VIM6 Gm18159-201ENSMUST00000174516 1070 ntBASIC15.14■□□□□ 0.01
StrcQ8VIM6 Mir6998-201ENSMUST00000183343 64 ntBASIC15.14■□□□□ 0.01
StrcQ8VIM6 Gm38228-201ENSMUST00000193169 1293 ntBASIC15.14■□□□□ 0.01
StrcQ8VIM6 Gm2965-201ENSMUST00000198365 343 ntBASIC15.14■□□□□ 0.01
StrcQ8VIM6 AC166344.1-201ENSMUST00000223745 674 ntBASIC15.14■□□□□ 0.01
StrcQ8VIM6 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.14■□□□□ 0.01
StrcQ8VIM6 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
StrcQ8VIM6 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
StrcQ8VIM6 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
StrcQ8VIM6 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
StrcQ8VIM6 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
StrcQ8VIM6 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
StrcQ8VIM6 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
StrcQ8VIM6 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
StrcQ8VIM6 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.13■□□□□ 0.01
StrcQ8VIM6 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
StrcQ8VIM6 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
StrcQ8VIM6 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
StrcQ8VIM6 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
StrcQ8VIM6 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
StrcQ8VIM6 Gm28388-201ENSMUST00000186262 437 ntBASIC15.13■□□□□ 0.01
StrcQ8VIM6 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
StrcQ8VIM6 Gm26448-201ENSMUST00000082446 203 ntBASIC15.13■□□□□ 0.01
StrcQ8VIM6 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
StrcQ8VIM6 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
StrcQ8VIM6 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
StrcQ8VIM6 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
StrcQ8VIM6 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
StrcQ8VIM6 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
StrcQ8VIM6 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
StrcQ8VIM6 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
StrcQ8VIM6 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
StrcQ8VIM6 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.13■□□□□ 0.01
StrcQ8VIM6 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
StrcQ8VIM6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
StrcQ8VIM6 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
StrcQ8VIM6 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
StrcQ8VIM6 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
StrcQ8VIM6 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
StrcQ8VIM6 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
StrcQ8VIM6 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
StrcQ8VIM6 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC15.13■□□□□ 0.01
StrcQ8VIM6 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms