Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh18Q8VHR0 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Gm15393-201ENSMUST00000120499 219 ntBASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh18Q8VHR0 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh18Q8VHR0 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh18Q8VHR0 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pcdh18Q8VHR0 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh18Q8VHR0 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh18Q8VHR0 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.65□□□□□ -0.38
Pcdh18Q8VHR0 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh18Q8VHR0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh18Q8VHR0 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh18Q8VHR0 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh18Q8VHR0 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh18Q8VHR0 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh18Q8VHR0 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh18Q8VHR0 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh18Q8VHR0 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh18Q8VHR0 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh18Q8VHR0 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.65□□□□□ -0.38
Pcdh18Q8VHR0 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pcdh18Q8VHR0 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh18Q8VHR0 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh18Q8VHR0 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh18Q8VHR0 Gm4804-201ENSMUST00000182234 999 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms