Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Gm13365-201ENSMUST00000121188 973 ntBASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa1Q8VEE4 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rpa1Q8VEE4 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Rpa1Q8VEE4 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rpa1Q8VEE4 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.21□□□□□ -0.29
Rpa1Q8VEE4 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rpa1Q8VEE4 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rpa1Q8VEE4 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Rpa1Q8VEE4 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rpa1Q8VEE4 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rpa1Q8VEE4 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rpa1Q8VEE4 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rpa1Q8VEE4 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rpa1Q8VEE4 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rpa1Q8VEE4 Gm25287-201ENSMUST00000103846 110 ntBASIC13.21□□□□□ -0.29
Rpa1Q8VEE4 Gm22918-201ENSMUST00000103855 110 ntBASIC13.21□□□□□ -0.29
Rpa1Q8VEE4 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rpa1Q8VEE4 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.21□□□□□ -0.29
Rpa1Q8VEE4 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.21□□□□□ -0.29
Rpa1Q8VEE4 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rpa1Q8VEE4 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rpa1Q8VEE4 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.21□□□□□ -0.29
Rpa1Q8VEE4 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.21□□□□□ -0.29
Rpa1Q8VEE4 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rpa1Q8VEE4 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Rpa1Q8VEE4 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rpa1Q8VEE4 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Rpa1Q8VEE4 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rpa1Q8VEE4 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.21□□□□□ -0.3
Rpa1Q8VEE4 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rpa1Q8VEE4 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rpa1Q8VEE4 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rpa1Q8VEE4 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Rpa1Q8VEE4 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rpa1Q8VEE4 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rpa1Q8VEE4 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rpa1Q8VEE4 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Gm24543-201ENSMUST00000103867 82 ntBASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Gm4804-201ENSMUST00000182234 999 ntBASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms