Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Rnf8Q8VC56 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf8Q8VC56 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rnf8Q8VC56 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf8Q8VC56 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Rnf8Q8VC56 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rnf8Q8VC56 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf8Q8VC56 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf8Q8VC56 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf8Q8VC56 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf8Q8VC56 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf8Q8VC56 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.66□□□□□ -0.38
Rnf8Q8VC56 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.66□□□□□ -0.38
Rnf8Q8VC56 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rnf8Q8VC56 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 Gm37917-201ENSMUST00000194711 392 ntBASIC12.65□□□□□ -0.38
Rnf8Q8VC56 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.65□□□□□ -0.38
Rnf8Q8VC56 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.65□□□□□ -0.38
Rnf8Q8VC56 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.65□□□□□ -0.38
Rnf8Q8VC56 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf8Q8VC56 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Rnf8Q8VC56 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Rnf8Q8VC56 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Rnf8Q8VC56 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rnf8Q8VC56 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf8Q8VC56 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf8Q8VC56 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf8Q8VC56 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf8Q8VC56 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Rnf8Q8VC56 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.64□□□□□ -0.39
Rnf8Q8VC56 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Rnf8Q8VC56 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf8Q8VC56 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf8Q8VC56 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.64□□□□□ -0.39
Rnf8Q8VC56 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms