Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Pck2-205ENSMUST00000226352 2784 ntBASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Gm37785-201ENSMUST00000195783 2408 ntBASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cuedc1Q8R3V6 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.48
Cuedc1Q8R3V6 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.02□□□□□ -0.48
Cuedc1Q8R3V6 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cuedc1Q8R3V6 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Cuedc1Q8R3V6 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cuedc1Q8R3V6 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cuedc1Q8R3V6 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cuedc1Q8R3V6 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cuedc1Q8R3V6 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cuedc1Q8R3V6 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cuedc1Q8R3V6 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cuedc1Q8R3V6 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.02□□□□□ -0.48
Cuedc1Q8R3V6 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Cuedc1Q8R3V6 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cuedc1Q8R3V6 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cuedc1Q8R3V6 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cuedc1Q8R3V6 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cuedc1Q8R3V6 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cuedc1Q8R3V6 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cuedc1Q8R3V6 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cuedc1Q8R3V6 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cuedc1Q8R3V6 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.02□□□□□ -0.49
Cuedc1Q8R3V6 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cuedc1Q8R3V6 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cuedc1Q8R3V6 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cuedc1Q8R3V6 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cuedc1Q8R3V6 Gm8213-201ENSMUST00000118191 441 ntBASIC12.02□□□□□ -0.49
Cuedc1Q8R3V6 Gm13350-201ENSMUST00000120519 479 ntBASIC12.02□□□□□ -0.49
Cuedc1Q8R3V6 Gm38241-201ENSMUST00000192641 898 ntBASIC12.02□□□□□ -0.49
Cuedc1Q8R3V6 Gm4857-201ENSMUST00000192718 785 ntBASIC12.02□□□□□ -0.49
Cuedc1Q8R3V6 Gm42627-201ENSMUST00000197347 224 ntBASIC12.02□□□□□ -0.49
Cuedc1Q8R3V6 Gm44364-201ENSMUST00000198368 141 ntBASIC12.02□□□□□ -0.49
Cuedc1Q8R3V6 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cuedc1Q8R3V6 Gm44882-201ENSMUST00000205702 802 ntBASIC12.02□□□□□ -0.49
Cuedc1Q8R3V6 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.02□□□□□ -0.49
Cuedc1Q8R3V6 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Cuedc1Q8R3V6 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.02□□□□□ -0.49
Cuedc1Q8R3V6 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC12.02□□□□□ -0.49
Cuedc1Q8R3V6 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cuedc1Q8R3V6 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms