Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Slf1Q8R3P9 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.24□□□□□ -0.29
Slf1Q8R3P9 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.24□□□□□ -0.29
Slf1Q8R3P9 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Gm29741-201ENSMUST00000192667 421 ntBASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.24□□□□□ -0.29
Slf1Q8R3P9 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slf1Q8R3P9 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Slf1Q8R3P9 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Gm12428-201ENSMUST00000119844 727 ntBASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Gm25948-201ENSMUST00000175334 112 ntBASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Slf1Q8R3P9 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Slf1Q8R3P9 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slf1Q8R3P9 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.22□□□□□ -0.29
Slf1Q8R3P9 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Slf1Q8R3P9 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slf1Q8R3P9 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slf1Q8R3P9 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.22□□□□□ -0.29
Slf1Q8R3P9 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms