Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC16.04■□□□□ 0.16
Sf3a1Q8K4Z5 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Zscan30-202ENSMUST00000224144 1458 ntBASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Gm13123-201ENSMUST00000122173 492 ntBASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Gm37922-201ENSMUST00000195596 455 ntBASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Sf3a1Q8K4Z5 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC16.02■□□□□ 0.16
Sf3a1Q8K4Z5 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sf3a1Q8K4Z5 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC16.02■□□□□ 0.16
Sf3a1Q8K4Z5 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sf3a1Q8K4Z5 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sf3a1Q8K4Z5 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sf3a1Q8K4Z5 Gm4984-201ENSMUST00000115987 360 ntBASIC16.02■□□□□ 0.16
Sf3a1Q8K4Z5 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC16.02■□□□□ 0.16
Sf3a1Q8K4Z5 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC16.02■□□□□ 0.16
Sf3a1Q8K4Z5 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC16.02■□□□□ 0.16
Sf3a1Q8K4Z5 Gm27331-201ENSMUST00000183705 60 ntBASIC16.02■□□□□ 0.16
Sf3a1Q8K4Z5 Gm37497-201ENSMUST00000195830 798 ntBASIC16.02■□□□□ 0.16
Sf3a1Q8K4Z5 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sf3a1Q8K4Z5 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC16.02■□□□□ 0.16
Sf3a1Q8K4Z5 Gm19931-201ENSMUST00000198920 368 ntBASIC16.02■□□□□ 0.16
Sf3a1Q8K4Z5 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC16.02■□□□□ 0.16
Sf3a1Q8K4Z5 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC16.02■□□□□ 0.16
Sf3a1Q8K4Z5 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sf3a1Q8K4Z5 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sf3a1Q8K4Z5 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sf3a1Q8K4Z5 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sf3a1Q8K4Z5 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sf3a1Q8K4Z5 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sf3a1Q8K4Z5 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Sf3a1Q8K4Z5 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Sf3a1Q8K4Z5 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sf3a1Q8K4Z5 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sf3a1Q8K4Z5 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Sf3a1Q8K4Z5 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sf3a1Q8K4Z5 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sf3a1Q8K4Z5 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sf3a1Q8K4Z5 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sf3a1Q8K4Z5 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sf3a1Q8K4Z5 AC114008.2-201ENSMUST00000227699 1347 ntBASIC16.01■□□□□ 0.15
Sf3a1Q8K4Z5 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sf3a1Q8K4Z5 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sf3a1Q8K4Z5 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Sf3a1Q8K4Z5 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sf3a1Q8K4Z5 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sf3a1Q8K4Z5 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sf3a1Q8K4Z5 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sf3a1Q8K4Z5 Gm13369-201ENSMUST00000119442 987 ntBASIC16.01■□□□□ 0.15
Sf3a1Q8K4Z5 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC16.01■□□□□ 0.15
Sf3a1Q8K4Z5 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sf3a1Q8K4Z5 Gm29127-201ENSMUST00000188304 517 ntBASIC16.01■□□□□ 0.15
Sf3a1Q8K4Z5 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC16.01■□□□□ 0.15
Sf3a1Q8K4Z5 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC16.01■□□□□ 0.15
Sf3a1Q8K4Z5 Gm29705-201ENSMUST00000212598 474 ntBASIC16.01■□□□□ 0.15
Sf3a1Q8K4Z5 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sf3a1Q8K4Z5 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sf3a1Q8K4Z5 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sf3a1Q8K4Z5 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC16.01■□□□□ 0.15
Sf3a1Q8K4Z5 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sf3a1Q8K4Z5 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sf3a1Q8K4Z5 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sf3a1Q8K4Z5 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sf3a1Q8K4Z5 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sf3a1Q8K4Z5 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms