Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Gm14704-201ENSMUST00000120300 874 ntBASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Gm27501-201ENSMUST00000183599 107 ntBASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Gm27516-201ENSMUST00000184237 98 ntBASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Mir8109-201ENSMUST00000184375 117 ntBASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Gm32025-201ENSMUST00000217960 307 ntBASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rdh1Q8CGV4 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Rdh1Q8CGV4 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Rdh1Q8CGV4 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Rdh1Q8CGV4 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rdh1Q8CGV4 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rdh1Q8CGV4 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rdh1Q8CGV4 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Rdh1Q8CGV4 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rdh1Q8CGV4 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rdh1Q8CGV4 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rdh1Q8CGV4 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rdh1Q8CGV4 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rdh1Q8CGV4 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Olfr284-202ENSMUST00000206647 966 ntBASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rdh1Q8CGV4 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rdh1Q8CGV4 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rdh1Q8CGV4 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rdh1Q8CGV4 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rdh1Q8CGV4 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rdh1Q8CGV4 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rdh1Q8CGV4 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rdh1Q8CGV4 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rdh1Q8CGV4 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rdh1Q8CGV4 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.69□□□□□ -0.38
Rdh1Q8CGV4 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rdh1Q8CGV4 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rdh1Q8CGV4 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rdh1Q8CGV4 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rdh1Q8CGV4 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rdh1Q8CGV4 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms