Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 Gm15240-201ENSMUST00000118156 720 ntBASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc87Q8CDL9 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Gm19931-201ENSMUST00000198920 368 ntBASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
Ccdc87Q8CDL9 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.9□□□□□ -0.19
Ccdc87Q8CDL9 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Ccdc87Q8CDL9 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ccdc87Q8CDL9 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.9□□□□□ -0.19
Ccdc87Q8CDL9 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Gm18905-201ENSMUST00000205454 928 ntBASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms