Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rd3Q8BRE0 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rd3Q8BRE0 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Rd3Q8BRE0 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rd3Q8BRE0 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rd3Q8BRE0 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rd3Q8BRE0 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Gm22323-201ENSMUST00000103832 109 ntBASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.86□□□□□ -0.19
Rd3Q8BRE0 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Gm20482-202ENSMUST00000174729 825 ntBASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Morn2-202ENSMUST00000227729 656 ntBASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.86□□□□□ -0.19
Rd3Q8BRE0 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.85□□□□□ -0.19
Rd3Q8BRE0 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rd3Q8BRE0 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms