Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh19Q80TF3 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 Gm42627-201ENSMUST00000197347 224 ntBASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh19Q80TF3 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Gm38002-201ENSMUST00000193255 180 ntBASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Gm19163-201ENSMUST00000223313 780 ntBASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh19Q80TF3 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms