Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scaf8Q6DID3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scaf8Q6DID3 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Scaf8Q6DID3 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.29■□□□□ 0.04
Scaf8Q6DID3 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.29■□□□□ 0.04
Scaf8Q6DID3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scaf8Q6DID3 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scaf8Q6DID3 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scaf8Q6DID3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scaf8Q6DID3 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scaf8Q6DID3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scaf8Q6DID3 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.29■□□□□ 0.04
Scaf8Q6DID3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scaf8Q6DID3 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scaf8Q6DID3 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Scaf8Q6DID3 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC15.29■□□□□ 0.04
Scaf8Q6DID3 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scaf8Q6DID3 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scaf8Q6DID3 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
Scaf8Q6DID3 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC15.29■□□□□ 0.04
Scaf8Q6DID3 Gm44651-201ENSMUST00000207343 372 ntBASIC15.29■□□□□ 0.04
Scaf8Q6DID3 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC15.29■□□□□ 0.04
Scaf8Q6DID3 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scaf8Q6DID3 AC166095.1-201ENSMUST00000223731 1241 ntBASIC15.29■□□□□ 0.04
Scaf8Q6DID3 AC154276.3-201ENSMUST00000227643 998 ntBASIC15.29■□□□□ 0.04
Scaf8Q6DID3 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scaf8Q6DID3 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.29■□□□□ 0.04
Scaf8Q6DID3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scaf8Q6DID3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Scaf8Q6DID3 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Scaf8Q6DID3 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Scaf8Q6DID3 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scaf8Q6DID3 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.29■□□□□ 0.04
Scaf8Q6DID3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scaf8Q6DID3 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scaf8Q6DID3 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.28■□□□□ 0.04
Scaf8Q6DID3 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.28■□□□□ 0.04
Scaf8Q6DID3 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scaf8Q6DID3 Gm3287-205ENSMUST00000228893 1332 ntBASIC15.28■□□□□ 0.04
Scaf8Q6DID3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Scaf8Q6DID3 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scaf8Q6DID3 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scaf8Q6DID3 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC15.28■□□□□ 0.04
Scaf8Q6DID3 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scaf8Q6DID3 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Scaf8Q6DID3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scaf8Q6DID3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scaf8Q6DID3 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scaf8Q6DID3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scaf8Q6DID3 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scaf8Q6DID3 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Scaf8Q6DID3 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scaf8Q6DID3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scaf8Q6DID3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Scaf8Q6DID3 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.28■□□□□ 0.04
Scaf8Q6DID3 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scaf8Q6DID3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scaf8Q6DID3 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scaf8Q6DID3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scaf8Q6DID3 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scaf8Q6DID3 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scaf8Q6DID3 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scaf8Q6DID3 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scaf8Q6DID3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Scaf8Q6DID3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Scaf8Q6DID3 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Scaf8Q6DID3 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Scaf8Q6DID3 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scaf8Q6DID3 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scaf8Q6DID3 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Scaf8Q6DID3 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Scaf8Q6DID3 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Scaf8Q6DID3 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Scaf8Q6DID3 Gm19459-201ENSMUST00000176240 835 ntBASIC15.27■□□□□ 0.04
Scaf8Q6DID3 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Scaf8Q6DID3 Gm43037-201ENSMUST00000196808 250 ntBASIC15.27■□□□□ 0.04
Scaf8Q6DID3 Gm45433-201ENSMUST00000209386 247 ntBASIC15.27■□□□□ 0.04
Scaf8Q6DID3 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC15.27■□□□□ 0.04
Scaf8Q6DID3 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.27■□□□□ 0.04
Scaf8Q6DID3 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC15.27■□□□□ 0.04
Scaf8Q6DID3 AC155266.1-201ENSMUST00000220762 904 ntBASIC15.27■□□□□ 0.04
Scaf8Q6DID3 Spcs1-203ENSMUST00000226374 592 ntBASIC15.27■□□□□ 0.04
Scaf8Q6DID3 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scaf8Q6DID3 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scaf8Q6DID3 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scaf8Q6DID3 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scaf8Q6DID3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scaf8Q6DID3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scaf8Q6DID3 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Scaf8Q6DID3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scaf8Q6DID3 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Scaf8Q6DID3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Scaf8Q6DID3 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Scaf8Q6DID3 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scaf8Q6DID3 Gm37827-201ENSMUST00000194486 1542 ntBASIC15.27■□□□□ 0.03
Scaf8Q6DID3 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scaf8Q6DID3 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scaf8Q6DID3 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Scaf8Q6DID3 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
Scaf8Q6DID3 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms