Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Six4Q61321 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Six4Q61321 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Six4Q61321 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Six4Q61321 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Six4Q61321 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Six4Q61321 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Six4Q61321 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.21□□□□□ -0.29
Six4Q61321 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Six4Q61321 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.21□□□□□ -0.3
Six4Q61321 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Six4Q61321 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Six4Q61321 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Six4Q61321 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.21□□□□□ -0.3
Six4Q61321 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Six4Q61321 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Six4Q61321 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Six4Q61321 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Six4Q61321 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Six4Q61321 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Six4Q61321 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Six4Q61321 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Six4Q61321 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Six4Q61321 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Six4Q61321 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.21□□□□□ -0.3
Six4Q61321 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.21□□□□□ -0.3
Six4Q61321 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Six4Q61321 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.2□□□□□ -0.3
Six4Q61321 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Six4Q61321 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Six4Q61321 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Six4Q61321 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Six4Q61321 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Six4Q61321 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Six4Q61321 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Six4Q61321 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.2□□□□□ -0.3
Six4Q61321 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Six4Q61321 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Six4Q61321 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Six4Q61321 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Six4Q61321 Gm13829-201ENSMUST00000119600 138 ntBASIC13.2□□□□□ -0.3
Six4Q61321 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.2□□□□□ -0.3
Six4Q61321 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Six4Q61321 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Six4Q61321 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.2□□□□□ -0.3
Six4Q61321 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.2□□□□□ -0.3
Six4Q61321 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Six4Q61321 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.2□□□□□ -0.3
Six4Q61321 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Six4Q61321 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.2□□□□□ -0.3
Six4Q61321 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.2□□□□□ -0.3
Six4Q61321 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.2□□□□□ -0.3
Six4Q61321 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Six4Q61321 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Six4Q61321 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Six4Q61321 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Six4Q61321 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Six4Q61321 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Six4Q61321 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Six4Q61321 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Six4Q61321 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Six4Q61321 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Six4Q61321 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.2□□□□□ -0.3
Six4Q61321 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Six4Q61321 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.2□□□□□ -0.3
Six4Q61321 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Six4Q61321 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Six4Q61321 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.2□□□□□ -0.3
Six4Q61321 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.2□□□□□ -0.3
Six4Q61321 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Six4Q61321 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six4Q61321 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six4Q61321 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six4Q61321 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
Six4Q61321 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Six4Q61321 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six4Q61321 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.19□□□□□ -0.3
Six4Q61321 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six4Q61321 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six4Q61321 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six4Q61321 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six4Q61321 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Six4Q61321 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.19□□□□□ -0.3
Six4Q61321 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Six4Q61321 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Six4Q61321 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.19□□□□□ -0.3
Six4Q61321 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six4Q61321 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six4Q61321 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Six4Q61321 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six4Q61321 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six4Q61321 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six4Q61321 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six4Q61321 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Six4Q61321 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.19□□□□□ -0.3
Six4Q61321 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six4Q61321 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Six4Q61321 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six4Q61321 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Six4Q61321 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms