Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rc3h1Q4VGL6 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Gm44401-201ENSMUST00000204462 2375 ntBASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Gm22121-201ENSMUST00000175148 54 ntBASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.12■□□□□ 0.01
Rc3h1Q4VGL6 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Gm6023-201ENSMUST00000118217 606 ntBASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Gm14704-201ENSMUST00000120300 874 ntBASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Gm8738-201ENSMUST00000172606 329 ntBASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Gm29396-201ENSMUST00000185659 716 ntBASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Gm18584-201ENSMUST00000203098 964 ntBASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Gm8227-201ENSMUST00000223306 571 ntBASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rc3h1Q4VGL6 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms