Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trim80Q3V061 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim80Q3V061 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim80Q3V061 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim80Q3V061 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.57□□□□□ -0.24
Trim80Q3V061 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trim80Q3V061 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim80Q3V061 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trim80Q3V061 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim80Q3V061 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim80Q3V061 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim80Q3V061 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trim80Q3V061 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim80Q3V061 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim80Q3V061 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim80Q3V061 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.56□□□□□ -0.24
Trim80Q3V061 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim80Q3V061 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim80Q3V061 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim80Q3V061 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trim80Q3V061 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim80Q3V061 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim80Q3V061 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trim80Q3V061 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.56□□□□□ -0.24
Trim80Q3V061 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim80Q3V061 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim80Q3V061 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim80Q3V061 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trim80Q3V061 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim80Q3V061 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.56□□□□□ -0.24
Trim80Q3V061 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim80Q3V061 Gm6218-201ENSMUST00000219812 628 ntBASIC13.56□□□□□ -0.24
Trim80Q3V061 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim80Q3V061 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim80Q3V061 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim80Q3V061 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim80Q3V061 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim80Q3V061 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.56□□□□□ -0.24
Trim80Q3V061 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim80Q3V061 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim80Q3V061 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.56□□□□□ -0.24
Trim80Q3V061 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim80Q3V061 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim80Q3V061 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim80Q3V061 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim80Q3V061 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim80Q3V061 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim80Q3V061 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim80Q3V061 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.55□□□□□ -0.24
Trim80Q3V061 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim80Q3V061 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trim80Q3V061 Gm6912-201ENSMUST00000117218 544 ntBASIC13.55□□□□□ -0.24
Trim80Q3V061 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim80Q3V061 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Trim80Q3V061 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.55□□□□□ -0.24
Trim80Q3V061 Gm18018-201ENSMUST00000198273 408 ntBASIC13.55□□□□□ -0.24
Trim80Q3V061 Gm16476-201ENSMUST00000221544 139 ntBASIC13.55□□□□□ -0.24
Trim80Q3V061 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim80Q3V061 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim80Q3V061 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim80Q3V061 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim80Q3V061 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim80Q3V061 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Trim80Q3V061 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim80Q3V061 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim80Q3V061 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim80Q3V061 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim80Q3V061 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.55□□□□□ -0.24
Trim80Q3V061 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim80Q3V061 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim80Q3V061 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim80Q3V061 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim80Q3V061 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim80Q3V061 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim80Q3V061 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim80Q3V061 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim80Q3V061 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim80Q3V061 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim80Q3V061 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim80Q3V061 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim80Q3V061 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trim80Q3V061 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trim80Q3V061 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim80Q3V061 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim80Q3V061 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim80Q3V061 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.54□□□□□ -0.24
Trim80Q3V061 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim80Q3V061 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim80Q3V061 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim80Q3V061 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim80Q3V061 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.54□□□□□ -0.24
Trim80Q3V061 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.54□□□□□ -0.24
Trim80Q3V061 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.54□□□□□ -0.24
Trim80Q3V061 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.54□□□□□ -0.24
Trim80Q3V061 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.54□□□□□ -0.24
Trim80Q3V061 Mir1897-201ENSMUST00000122581 272 ntBASIC13.54□□□□□ -0.24
Trim80Q3V061 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.54□□□□□ -0.24
Trim80Q3V061 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim80Q3V061 Gm6745-201ENSMUST00000199216 526 ntBASIC13.54□□□□□ -0.24
Trim80Q3V061 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms