Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SfswapQ3USH5 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.61■□□□□ 0.09
SfswapQ3USH5 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SfswapQ3USH5 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SfswapQ3USH5 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SfswapQ3USH5 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SfswapQ3USH5 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SfswapQ3USH5 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
SfswapQ3USH5 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.6■□□□□ 0.09
SfswapQ3USH5 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SfswapQ3USH5 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC15.6■□□□□ 0.09
SfswapQ3USH5 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SfswapQ3USH5 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC15.6■□□□□ 0.09
SfswapQ3USH5 Gm3890-201ENSMUST00000182416 207 ntBASIC15.6■□□□□ 0.09
SfswapQ3USH5 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC15.6■□□□□ 0.09
SfswapQ3USH5 Gm29396-201ENSMUST00000185659 716 ntBASIC15.6■□□□□ 0.09
SfswapQ3USH5 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC15.6■□□□□ 0.09
SfswapQ3USH5 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SfswapQ3USH5 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SfswapQ3USH5 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SfswapQ3USH5 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SfswapQ3USH5 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SfswapQ3USH5 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SfswapQ3USH5 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SfswapQ3USH5 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SfswapQ3USH5 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SfswapQ3USH5 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
SfswapQ3USH5 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SfswapQ3USH5 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
SfswapQ3USH5 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SfswapQ3USH5 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SfswapQ3USH5 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SfswapQ3USH5 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
SfswapQ3USH5 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SfswapQ3USH5 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.59■□□□□ 0.09
SfswapQ3USH5 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.59■□□□□ 0.09
SfswapQ3USH5 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SfswapQ3USH5 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SfswapQ3USH5 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.59■□□□□ 0.09
SfswapQ3USH5 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
SfswapQ3USH5 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SfswapQ3USH5 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SfswapQ3USH5 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SfswapQ3USH5 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SfswapQ3USH5 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SfswapQ3USH5 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SfswapQ3USH5 Gm13342-201ENSMUST00000121055 207 ntBASIC15.59■□□□□ 0.09
SfswapQ3USH5 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SfswapQ3USH5 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC15.59■□□□□ 0.09
SfswapQ3USH5 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
SfswapQ3USH5 Gm9368-201ENSMUST00000219348 831 ntBASIC15.59■□□□□ 0.09
SfswapQ3USH5 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC15.59■□□□□ 0.09
SfswapQ3USH5 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
SfswapQ3USH5 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SfswapQ3USH5 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SfswapQ3USH5 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.59■□□□□ 0.09
SfswapQ3USH5 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SfswapQ3USH5 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.59■□□□□ 0.09
SfswapQ3USH5 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SfswapQ3USH5 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SfswapQ3USH5 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.59■□□□□ 0.09
SfswapQ3USH5 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SfswapQ3USH5 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SfswapQ3USH5 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SfswapQ3USH5 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SfswapQ3USH5 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SfswapQ3USH5 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SfswapQ3USH5 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
SfswapQ3USH5 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SfswapQ3USH5 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
SfswapQ3USH5 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
SfswapQ3USH5 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SfswapQ3USH5 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SfswapQ3USH5 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SfswapQ3USH5 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SfswapQ3USH5 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SfswapQ3USH5 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.58■□□□□ 0.08
SfswapQ3USH5 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SfswapQ3USH5 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SfswapQ3USH5 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SfswapQ3USH5 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SfswapQ3USH5 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SfswapQ3USH5 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.58■□□□□ 0.08
SfswapQ3USH5 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC15.58■□□□□ 0.08
SfswapQ3USH5 Gm15370-201ENSMUST00000117158 253 ntBASIC15.58■□□□□ 0.08
SfswapQ3USH5 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SfswapQ3USH5 Gm7584-201ENSMUST00000175829 940 ntBASIC15.58■□□□□ 0.08
SfswapQ3USH5 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC15.58■□□□□ 0.08
SfswapQ3USH5 Gm3961-201ENSMUST00000204425 994 ntBASIC15.58■□□□□ 0.08
SfswapQ3USH5 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC15.58■□□□□ 0.08
SfswapQ3USH5 Cts7-204ENSMUST00000225321 1257 ntBASIC15.58■□□□□ 0.08
SfswapQ3USH5 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SfswapQ3USH5 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SfswapQ3USH5 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SfswapQ3USH5 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SfswapQ3USH5 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.58■□□□□ 0.08
SfswapQ3USH5 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SfswapQ3USH5 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
SfswapQ3USH5 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SfswapQ3USH5 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms