Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.14□□□□□ -0.15
Snx27Q3UHD6 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Gm15370-201ENSMUST00000117158 253 ntBASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.13□□□□□ -0.15
Snx27Q3UHD6 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Gm7584-201ENSMUST00000175829 940 ntBASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Gm43758-201ENSMUST00000199500 367 ntBASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Snx27Q3UHD6 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Gm4986-201ENSMUST00000119731 549 ntBASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Gm13297-201ENSMUST00000120205 934 ntBASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Snx27Q3UHD6 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Gm7783-201ENSMUST00000204795 781 ntBASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Gm45865-201ENSMUST00000211815 945 ntBASIC14.12□□□□□ -0.15
Snx27Q3UHD6 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.12□□□□□ -0.15
Snx27Q3UHD6 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.12□□□□□ -0.15
Snx27Q3UHD6 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Snx27Q3UHD6 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Snx27Q3UHD6 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Snx27Q3UHD6 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snx27Q3UHD6 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snx27Q3UHD6 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.11□□□□□ -0.15
Snx27Q3UHD6 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.11□□□□□ -0.15
Snx27Q3UHD6 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.11□□□□□ -0.15
Snx27Q3UHD6 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snx27Q3UHD6 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snx27Q3UHD6 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snx27Q3UHD6 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.11□□□□□ -0.15
Snx27Q3UHD6 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.11□□□□□ -0.15
Snx27Q3UHD6 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Snx27Q3UHD6 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snx27Q3UHD6 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Snx27Q3UHD6 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snx27Q3UHD6 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snx27Q3UHD6 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Snx27Q3UHD6 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Snx27Q3UHD6 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Snx27Q3UHD6 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Snx27Q3UHD6 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms