Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lins1Q3U1D0 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Lins1Q3U1D0 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lins1Q3U1D0 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lins1Q3U1D0 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lins1Q3U1D0 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lins1Q3U1D0 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lins1Q3U1D0 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lins1Q3U1D0 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Lins1Q3U1D0 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Lins1Q3U1D0 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lins1Q3U1D0 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lins1Q3U1D0 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lins1Q3U1D0 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Lins1Q3U1D0 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.57■□□□□ 0.08
Lins1Q3U1D0 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lins1Q3U1D0 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lins1Q3U1D0 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lins1Q3U1D0 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lins1Q3U1D0 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lins1Q3U1D0 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lins1Q3U1D0 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lins1Q3U1D0 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.56■□□□□ 0.08
Lins1Q3U1D0 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Lins1Q3U1D0 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lins1Q3U1D0 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lins1Q3U1D0 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC15.56■□□□□ 0.08
Lins1Q3U1D0 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC15.56■□□□□ 0.08
Lins1Q3U1D0 Gm26185-201ENSMUST00000157692 266 ntBASIC15.56■□□□□ 0.08
Lins1Q3U1D0 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Lins1Q3U1D0 Gm7895-201ENSMUST00000187459 1173 ntBASIC15.56■□□□□ 0.08
Lins1Q3U1D0 Gm28693-202ENSMUST00000190758 331 ntBASIC15.56■□□□□ 0.08
Lins1Q3U1D0 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.56■□□□□ 0.08
Lins1Q3U1D0 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.56■□□□□ 0.08
Lins1Q3U1D0 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC15.56■□□□□ 0.08
Lins1Q3U1D0 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lins1Q3U1D0 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Lins1Q3U1D0 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lins1Q3U1D0 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC15.56■□□□□ 0.08
Lins1Q3U1D0 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lins1Q3U1D0 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lins1Q3U1D0 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lins1Q3U1D0 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lins1Q3U1D0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Lins1Q3U1D0 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lins1Q3U1D0 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lins1Q3U1D0 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
Lins1Q3U1D0 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lins1Q3U1D0 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Lins1Q3U1D0 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lins1Q3U1D0 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lins1Q3U1D0 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.55■□□□□ 0.08
Lins1Q3U1D0 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lins1Q3U1D0 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lins1Q3U1D0 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Lins1Q3U1D0 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lins1Q3U1D0 Gm15370-201ENSMUST00000117158 253 ntBASIC15.55■□□□□ 0.08
Lins1Q3U1D0 Gm15236-201ENSMUST00000117309 379 ntBASIC15.55■□□□□ 0.08
Lins1Q3U1D0 Gm6023-201ENSMUST00000118217 606 ntBASIC15.55■□□□□ 0.08
Lins1Q3U1D0 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Lins1Q3U1D0 Gm5637-201ENSMUST00000153890 1119 ntBASIC15.55■□□□□ 0.08
Lins1Q3U1D0 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lins1Q3U1D0 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lins1Q3U1D0 Gm37259-201ENSMUST00000193903 849 ntBASIC15.55■□□□□ 0.08
Lins1Q3U1D0 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lins1Q3U1D0 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lins1Q3U1D0 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lins1Q3U1D0 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lins1Q3U1D0 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lins1Q3U1D0 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lins1Q3U1D0 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lins1Q3U1D0 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lins1Q3U1D0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lins1Q3U1D0 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lins1Q3U1D0 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lins1Q3U1D0 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lins1Q3U1D0 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lins1Q3U1D0 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lins1Q3U1D0 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lins1Q3U1D0 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Lins1Q3U1D0 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lins1Q3U1D0 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lins1Q3U1D0 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lins1Q3U1D0 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Lins1Q3U1D0 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lins1Q3U1D0 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC15.54■□□□□ 0.08
Lins1Q3U1D0 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lins1Q3U1D0 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lins1Q3U1D0 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.54■□□□□ 0.08
Lins1Q3U1D0 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Lins1Q3U1D0 Gm3890-201ENSMUST00000182416 207 ntBASIC15.54■□□□□ 0.08
Lins1Q3U1D0 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC15.54■□□□□ 0.08
Lins1Q3U1D0 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC15.54■□□□□ 0.08
Lins1Q3U1D0 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Lins1Q3U1D0 Gm7046-201ENSMUST00000221351 977 ntBASIC15.54■□□□□ 0.08
Lins1Q3U1D0 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lins1Q3U1D0 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lins1Q3U1D0 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.54■□□□□ 0.08
Lins1Q3U1D0 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Lins1Q3U1D0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms