Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim63Q38HM4 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trim63Q38HM4 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trim63Q38HM4 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim63Q38HM4 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trim63Q38HM4 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim63Q38HM4 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trim63Q38HM4 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim63Q38HM4 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.73□□□□□ -0.69
Trim63Q38HM4 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim63Q38HM4 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.73□□□□□ -0.69
Trim63Q38HM4 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC10.73□□□□□ -0.69
Trim63Q38HM4 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trim63Q38HM4 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.72□□□□□ -0.69
Trim63Q38HM4 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Gm4459-201ENSMUST00000118750 468 ntBASIC10.72□□□□□ -0.69
Trim63Q38HM4 Gm13312-201ENSMUST00000119631 718 ntBASIC10.72□□□□□ -0.69
Trim63Q38HM4 Gm12497-201ENSMUST00000138778 237 ntBASIC10.72□□□□□ -0.69
Trim63Q38HM4 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trim63Q38HM4 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.72□□□□□ -0.69
Trim63Q38HM4 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.72□□□□□ -0.69
Trim63Q38HM4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.72□□□□□ -0.69
Trim63Q38HM4 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trim63Q38HM4 Gm43014-201ENSMUST00000198568 2443 ntBASIC10.72□□□□□ -0.69
Trim63Q38HM4 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.71□□□□□ -0.69
Trim63Q38HM4 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trim63Q38HM4 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trim63Q38HM4 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trim63Q38HM4 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trim63Q38HM4 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trim63Q38HM4 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trim63Q38HM4 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trim63Q38HM4 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.71□□□□□ -0.69
Trim63Q38HM4 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Trim63Q38HM4 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trim63Q38HM4 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trim63Q38HM4 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Trim63Q38HM4 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trim63Q38HM4 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trim63Q38HM4 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trim63Q38HM4 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trim63Q38HM4 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.71□□□□□ -0.69
Trim63Q38HM4 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trim63Q38HM4 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC10.71□□□□□ -0.69
Trim63Q38HM4 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC10.71□□□□□ -0.69
Trim63Q38HM4 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC10.71□□□□□ -0.69
Trim63Q38HM4 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trim63Q38HM4 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC10.71□□□□□ -0.69
Trim63Q38HM4 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trim63Q38HM4 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trim63Q38HM4 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trim63Q38HM4 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC10.71□□□□□ -0.69
Trim63Q38HM4 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trim63Q38HM4 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trim63Q38HM4 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trim63Q38HM4 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trim63Q38HM4 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trim63Q38HM4 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trim63Q38HM4 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Trim63Q38HM4 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trim63Q38HM4 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms