Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Gm13385-201ENSMUST00000121089 220 ntBASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Ptchd3Q0EEE2 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ptchd3Q0EEE2 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms