Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Chd8Q09XV5 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.62□□□□□ -0.55
Chd8Q09XV5 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.62□□□□□ -0.55
Chd8Q09XV5 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chd8Q09XV5 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.62□□□□□ -0.55
Chd8Q09XV5 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.62□□□□□ -0.55
Chd8Q09XV5 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chd8Q09XV5 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chd8Q09XV5 Gm9116-201ENSMUST00000192400 1018 ntBASIC11.62□□□□□ -0.55
Chd8Q09XV5 Gm43997-201ENSMUST00000203986 1005 ntBASIC11.62□□□□□ -0.55
Chd8Q09XV5 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.62□□□□□ -0.55
Chd8Q09XV5 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chd8Q09XV5 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Chd8Q09XV5 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chd8Q09XV5 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Chd8Q09XV5 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chd8Q09XV5 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chd8Q09XV5 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Chd8Q09XV5 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chd8Q09XV5 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chd8Q09XV5 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chd8Q09XV5 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.62□□□□□ -0.55
Chd8Q09XV5 Gm14644-201ENSMUST00000116671 647 ntBASIC11.62□□□□□ -0.55
Chd8Q09XV5 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chd8Q09XV5 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chd8Q09XV5 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chd8Q09XV5 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.62□□□□□ -0.55
Chd8Q09XV5 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC11.62□□□□□ -0.55
Chd8Q09XV5 Mir6407-201ENSMUST00000184510 101 ntBASIC11.62□□□□□ -0.55
Chd8Q09XV5 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.62□□□□□ -0.55
Chd8Q09XV5 Ighv1-2-201ENSMUST00000195325 378 ntBASIC11.62□□□□□ -0.55
Chd8Q09XV5 Gm44980-201ENSMUST00000205826 314 ntBASIC11.62□□□□□ -0.55
Chd8Q09XV5 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.62□□□□□ -0.55
Chd8Q09XV5 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd8Q09XV5 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Gm5641-201ENSMUST00000091130 1488 ntBASIC11.61□□□□□ -0.55
Chd8Q09XV5 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.61□□□□□ -0.55
Chd8Q09XV5 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Gm15352-201ENSMUST00000118696 270 ntBASIC11.61□□□□□ -0.55
Chd8Q09XV5 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Gm4775-201ENSMUST00000169588 402 ntBASIC11.61□□□□□ -0.55
Chd8Q09XV5 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Chd8Q09XV5 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Chd8Q09XV5 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Gm18552-201ENSMUST00000187425 538 ntBASIC11.61□□□□□ -0.55
Chd8Q09XV5 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Gm43854-201ENSMUST00000200418 394 ntBASIC11.61□□□□□ -0.55
Chd8Q09XV5 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd8Q09XV5 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd8Q09XV5 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd8Q09XV5 Gm37166-201ENSMUST00000195473 2474 ntBASIC11.6□□□□□ -0.55
Chd8Q09XV5 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd8Q09XV5 AC159810.1-201ENSMUST00000214838 1480 ntBASIC11.6□□□□□ -0.55
Chd8Q09XV5 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd8Q09XV5 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd8Q09XV5 Gm13171-201ENSMUST00000117233 391 ntBASIC11.6□□□□□ -0.55
Chd8Q09XV5 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chd8Q09XV5 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chd8Q09XV5 Gm18499-201ENSMUST00000220808 1021 ntBASIC11.6□□□□□ -0.55
Chd8Q09XV5 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.6□□□□□ -0.55
Chd8Q09XV5 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd8Q09XV5 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd8Q09XV5 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chd8Q09XV5 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd8Q09XV5 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chd8Q09XV5 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd8Q09XV5 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC11.6□□□□□ -0.55
Chd8Q09XV5 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd8Q09XV5 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd8Q09XV5 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Chd8Q09XV5 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chd8Q09XV5 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd8Q09XV5 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.6□□□□□ -0.55
Chd8Q09XV5 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms