Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Hoxc4Q08624 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc4Q08624 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.56□□□□□ -0.4
Hoxc4Q08624 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc4Q08624 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc4Q08624 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc4Q08624 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc4Q08624 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc4Q08624 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.56□□□□□ -0.4
Hoxc4Q08624 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc4Q08624 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc4Q08624 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc4Q08624 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc4Q08624 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc4Q08624 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.55□□□□□ -0.4
Hoxc4Q08624 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc4Q08624 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc4Q08624 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.55□□□□□ -0.4
Hoxc4Q08624 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc4Q08624 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc4Q08624 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc4Q08624 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Hoxc4Q08624 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Hoxc4Q08624 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc4Q08624 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc4Q08624 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Hoxc4Q08624 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.55□□□□□ -0.4
Hoxc4Q08624 Gm6621-201ENSMUST00000193251 772 ntBASIC12.55□□□□□ -0.4
Hoxc4Q08624 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc4Q08624 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc4Q08624 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc4Q08624 Gm9257-201ENSMUST00000221254 232 ntBASIC12.55□□□□□ -0.4
Hoxc4Q08624 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc4Q08624 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc4Q08624 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Hoxc4Q08624 Mir339-201ENSMUST00000083659 96 ntBASIC12.55□□□□□ -0.4
Hoxc4Q08624 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Hoxc4Q08624 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc4Q08624 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc4Q08624 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.55□□□□□ -0.4
Hoxc4Q08624 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.55□□□□□ -0.4
Hoxc4Q08624 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc4Q08624 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc4Q08624 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.55□□□□□ -0.4
Hoxc4Q08624 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc4Q08624 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc4Q08624 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Hoxc4Q08624 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
Hoxc4Q08624 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.54□□□□□ -0.4
Hoxc4Q08624 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc4Q08624 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc4Q08624 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc4Q08624 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc4Q08624 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.54□□□□□ -0.4
Hoxc4Q08624 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc4Q08624 Gm22323-201ENSMUST00000103832 109 ntBASIC12.54□□□□□ -0.4
Hoxc4Q08624 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc4Q08624 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.54□□□□□ -0.4
Hoxc4Q08624 Gm13350-201ENSMUST00000120519 479 ntBASIC12.54□□□□□ -0.4
Hoxc4Q08624 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc4Q08624 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.54□□□□□ -0.4
Hoxc4Q08624 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Hoxc4Q08624 Gm5904-201ENSMUST00000210286 865 ntBASIC12.54□□□□□ -0.4
Hoxc4Q08624 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.54□□□□□ -0.4
Hoxc4Q08624 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.54□□□□□ -0.4
Hoxc4Q08624 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.54□□□□□ -0.4
Hoxc4Q08624 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.54□□□□□ -0.4
Hoxc4Q08624 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.54□□□□□ -0.4
Hoxc4Q08624 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.54□□□□□ -0.4
Hoxc4Q08624 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
Hoxc4Q08624 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Hoxc4Q08624 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Hoxc4Q08624 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Hoxc4Q08624 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc4Q08624 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Hoxc4Q08624 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc4Q08624 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc4Q08624 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc4Q08624 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Hoxc4Q08624 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.54□□□□□ -0.4
Hoxc4Q08624 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc4Q08624 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc4Q08624 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc4Q08624 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Gm24255-201ENSMUST00000104481 128 ntBASIC12.53□□□□□ -0.4
Hoxc4Q08624 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Gm13813-201ENSMUST00000120998 787 ntBASIC12.53□□□□□ -0.4
Hoxc4Q08624 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hoxc4Q08624 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc4Q08624 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms