Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.3□□□□□ -0.28
Ebf1Q07802 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.3□□□□□ -0.28
Ebf1Q07802 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Ebf1Q07802 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf1Q07802 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ebf1Q07802 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ebf1Q07802 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf1Q07802 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf1Q07802 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf1Q07802 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.29□□□□□ -0.28
Ebf1Q07802 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ebf1Q07802 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ebf1Q07802 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.29□□□□□ -0.28
Ebf1Q07802 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf1Q07802 Gm14350-201ENSMUST00000116642 640 ntBASIC13.29□□□□□ -0.28
Ebf1Q07802 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.29□□□□□ -0.28
Ebf1Q07802 Gm2231-201ENSMUST00000125661 612 ntBASIC13.29□□□□□ -0.28
Ebf1Q07802 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Ebf1Q07802 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.29□□□□□ -0.28
Ebf1Q07802 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf1Q07802 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.29□□□□□ -0.28
Ebf1Q07802 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.29□□□□□ -0.28
Ebf1Q07802 Gm8227-201ENSMUST00000223306 571 ntBASIC13.29□□□□□ -0.28
Ebf1Q07802 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf1Q07802 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf1Q07802 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ebf1Q07802 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf1Q07802 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.29□□□□□ -0.28
Ebf1Q07802 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
Ebf1Q07802 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf1Q07802 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf1Q07802 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf1Q07802 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf1Q07802 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf1Q07802 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.29□□□□□ -0.28
Ebf1Q07802 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ebf1Q07802 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf1Q07802 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ebf1Q07802 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf1Q07802 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf1Q07802 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf1Q07802 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf1Q07802 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf1Q07802 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf1Q07802 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.28□□□□□ -0.28
Ebf1Q07802 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf1Q07802 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf1Q07802 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.28□□□□□ -0.28
Ebf1Q07802 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf1Q07802 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf1Q07802 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf1Q07802 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Ebf1Q07802 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf1Q07802 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.28□□□□□ -0.28
Ebf1Q07802 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.28□□□□□ -0.28
Ebf1Q07802 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf1Q07802 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.28□□□□□ -0.28
Ebf1Q07802 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.28□□□□□ -0.28
Ebf1Q07802 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.28□□□□□ -0.28
Ebf1Q07802 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.28□□□□□ -0.28
Ebf1Q07802 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.28□□□□□ -0.28
Ebf1Q07802 Gm18041-201ENSMUST00000218210 618 ntBASIC13.28□□□□□ -0.28
Ebf1Q07802 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf1Q07802 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf1Q07802 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf1Q07802 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.28□□□□□ -0.28
Ebf1Q07802 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf1Q07802 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf1Q07802 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf1Q07802 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf1Q07802 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf1Q07802 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.28□□□□□ -0.28
Ebf1Q07802 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf1Q07802 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf1Q07802 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf1Q07802 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.28□□□□□ -0.28
Ebf1Q07802 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf1Q07802 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf1Q07802 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.28□□□□□ -0.28
Ebf1Q07802 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.28□□□□□ -0.28
Ebf1Q07802 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ebf1Q07802 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ebf1Q07802 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ebf1Q07802 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ebf1Q07802 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.27□□□□□ -0.28
Ebf1Q07802 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms