Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col10a1Q05306 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Col10a1Q05306 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col10a1Q05306 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Col10a1Q05306 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col10a1Q05306 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.1□□□□□ -0.47
Col10a1Q05306 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.1□□□□□ -0.47
Col10a1Q05306 Gm8810-201ENSMUST00000172895 754 ntBASIC12.1□□□□□ -0.47
Col10a1Q05306 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Col10a1Q05306 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.1□□□□□ -0.47
Col10a1Q05306 Gm8602-201ENSMUST00000184045 607 ntBASIC12.1□□□□□ -0.47
Col10a1Q05306 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.1□□□□□ -0.47
Col10a1Q05306 Gm44069-201ENSMUST00000204898 506 ntBASIC12.1□□□□□ -0.47
Col10a1Q05306 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col10a1Q05306 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Col10a1Q05306 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Col10a1Q05306 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Col10a1Q05306 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col10a1Q05306 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col10a1Q05306 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.1□□□□□ -0.47
Col10a1Q05306 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col10a1Q05306 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col10a1Q05306 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col10a1Q05306 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col10a1Q05306 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col10a1Q05306 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.09□□□□□ -0.47
Col10a1Q05306 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.09□□□□□ -0.47
Col10a1Q05306 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.09□□□□□ -0.47
Col10a1Q05306 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.09□□□□□ -0.47
Col10a1Q05306 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col10a1Q05306 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col10a1Q05306 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col10a1Q05306 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col10a1Q05306 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col10a1Q05306 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.09□□□□□ -0.47
Col10a1Q05306 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col10a1Q05306 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.09□□□□□ -0.47
Col10a1Q05306 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.09□□□□□ -0.47
Col10a1Q05306 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.09□□□□□ -0.47
Col10a1Q05306 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col10a1Q05306 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col10a1Q05306 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Col10a1Q05306 Gm10012-201ENSMUST00000078252 192 ntBASIC12.09□□□□□ -0.47
Col10a1Q05306 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col10a1Q05306 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Col10a1Q05306 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col10a1Q05306 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col10a1Q05306 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col10a1Q05306 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col10a1Q05306 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col10a1Q05306 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Col10a1Q05306 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col10a1Q05306 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col10a1Q05306 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col10a1Q05306 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col10a1Q05306 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col10a1Q05306 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Col10a1Q05306 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.47
Col10a1Q05306 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Col10a1Q05306 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Col10a1Q05306 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.08□□□□□ -0.47
Col10a1Q05306 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Col10a1Q05306 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col10a1Q05306 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col10a1Q05306 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col10a1Q05306 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col10a1Q05306 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col10a1Q05306 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Col10a1Q05306 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.08□□□□□ -0.48
Col10a1Q05306 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col10a1Q05306 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.08□□□□□ -0.48
Col10a1Q05306 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col10a1Q05306 Gm10156-201ENSMUST00000122364 462 ntBASIC12.08□□□□□ -0.48
Col10a1Q05306 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col10a1Q05306 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.08□□□□□ -0.48
Col10a1Q05306 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col10a1Q05306 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Col10a1Q05306 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.08□□□□□ -0.48
Col10a1Q05306 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.08□□□□□ -0.48
Col10a1Q05306 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col10a1Q05306 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.08□□□□□ -0.48
Col10a1Q05306 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Col10a1Q05306 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col10a1Q05306 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col10a1Q05306 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Col10a1Q05306 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col10a1Q05306 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Col10a1Q05306 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.08□□□□□ -0.48
Col10a1Q05306 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col10a1Q05306 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col10a1Q05306 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col10a1Q05306 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Col10a1Q05306 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col10a1Q05306 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col10a1Q05306 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Col10a1Q05306 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Col10a1Q05306 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Col10a1Q05306 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col10a1Q05306 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col10a1Q05306 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms