Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim43bP86448 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Trim43bP86448 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trim43bP86448 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43bP86448 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43bP86448 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43bP86448 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43bP86448 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43bP86448 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43bP86448 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43bP86448 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43bP86448 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.49□□□□□ -0.25
Trim43bP86448 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43bP86448 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Trim43bP86448 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trim43bP86448 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim43bP86448 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43bP86448 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43bP86448 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43bP86448 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43bP86448 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trim43bP86448 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trim43bP86448 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.49□□□□□ -0.25
Trim43bP86448 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43bP86448 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43bP86448 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43bP86448 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43bP86448 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43bP86448 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43bP86448 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.48□□□□□ -0.25
Trim43bP86448 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43bP86448 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43bP86448 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43bP86448 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim43bP86448 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43bP86448 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43bP86448 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim43bP86448 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.48□□□□□ -0.25
Trim43bP86448 Gm27772-201ENSMUST00000184900 187 ntBASIC13.48□□□□□ -0.25
Trim43bP86448 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43bP86448 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.48□□□□□ -0.25
Trim43bP86448 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim43bP86448 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim43bP86448 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43bP86448 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.48□□□□□ -0.25
Trim43bP86448 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43bP86448 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trim43bP86448 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43bP86448 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43bP86448 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.48□□□□□ -0.25
Trim43bP86448 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43bP86448 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43bP86448 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43bP86448 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43bP86448 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43bP86448 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43bP86448 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Trim43bP86448 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.48□□□□□ -0.25
Trim43bP86448 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43bP86448 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43bP86448 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43bP86448 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43bP86448 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43bP86448 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43bP86448 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43bP86448 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43bP86448 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trim43bP86448 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43bP86448 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim43bP86448 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim43bP86448 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim43bP86448 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.47□□□□□ -0.25
Trim43bP86448 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Trim43bP86448 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.47□□□□□ -0.25
Trim43bP86448 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms