Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdlim4P70271 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.94□□□□□ -0.66
Pdlim4P70271 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pdlim4P70271 Gm45743-201ENSMUST00000212701 2795 ntBASIC10.94□□□□□ -0.66
Pdlim4P70271 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 Gm7899-201ENSMUST00000192935 1897 ntBASIC10.93□□□□□ -0.66
Pdlim4P70271 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Pdlim4P70271 Gm9816-201ENSMUST00000122292 1414 ntBASIC10.93□□□□□ -0.66
Pdlim4P70271 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 Gm9755-201ENSMUST00000032981 1356 ntBASIC10.93□□□□□ -0.66
Pdlim4P70271 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.93□□□□□ -0.66
Pdlim4P70271 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 Gm12960-201ENSMUST00000120017 1066 ntBASIC10.93□□□□□ -0.66
Pdlim4P70271 Gm15806-201ENSMUST00000120696 955 ntBASIC10.93□□□□□ -0.66
Pdlim4P70271 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.93□□□□□ -0.66
Pdlim4P70271 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 Gm2495-201ENSMUST00000191160 466 ntBASIC10.93□□□□□ -0.66
Pdlim4P70271 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.93□□□□□ -0.66
Pdlim4P70271 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC10.93□□□□□ -0.66
Pdlim4P70271 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.93□□□□□ -0.66
Pdlim4P70271 Itm2b-204ENSMUST00000228637 783 ntBASIC10.93□□□□□ -0.66
Pdlim4P70271 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC10.93□□□□□ -0.66
Pdlim4P70271 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC10.93□□□□□ -0.66
Pdlim4P70271 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC10.93□□□□□ -0.66
Pdlim4P70271 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Pdlim4P70271 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.93□□□□□ -0.66
Pdlim4P70271 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Pdlim4P70271 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Pdlim4P70271 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.93□□□□□ -0.66
Pdlim4P70271 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Pdlim4P70271 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdlim4P70271 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Pdlim4P70271 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC10.92□□□□□ -0.66
Pdlim4P70271 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Pdlim4P70271 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Pdlim4P70271 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.92□□□□□ -0.66
Pdlim4P70271 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC10.92□□□□□ -0.66
Pdlim4P70271 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Pdlim4P70271 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Pdlim4P70271 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 Gm38671-201ENSMUST00000200573 130 ntBASIC10.92□□□□□ -0.66
Pdlim4P70271 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 Gm17794-201ENSMUST00000220252 955 ntBASIC10.92□□□□□ -0.66
Pdlim4P70271 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Pdlim4P70271 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Pdlim4P70271 Gm43273-201ENSMUST00000199649 2594 ntBASIC10.92□□□□□ -0.66
Pdlim4P70271 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 AC154262.2-201ENSMUST00000224310 2293 ntBASIC10.92□□□□□ -0.66
Pdlim4P70271 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Pdlim4P70271 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdlim4P70271 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms