Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm3P62311 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm3P62311 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm3P62311 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm3P62311 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.91□□□□□ -0.5
Lsm3P62311 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm3P62311 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Lsm3P62311 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm3P62311 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm3P62311 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Lsm3P62311 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Lsm3P62311 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm3P62311 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm3P62311 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm3P62311 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm3P62311 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Lsm3P62311 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Lsm3P62311 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm3P62311 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.9□□□□□ -0.5
Lsm3P62311 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm3P62311 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.9□□□□□ -0.5
Lsm3P62311 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm3P62311 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm3P62311 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm3P62311 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm3P62311 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.9□□□□□ -0.5
Lsm3P62311 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm3P62311 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm3P62311 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm3P62311 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm3P62311 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm3P62311 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC11.9□□□□□ -0.5
Lsm3P62311 Gm1401-201ENSMUST00000122048 772 ntBASIC11.9□□□□□ -0.5
Lsm3P62311 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.9□□□□□ -0.5
Lsm3P62311 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Lsm3P62311 Gm45841-201ENSMUST00000207700 164 ntBASIC11.9□□□□□ -0.5
Lsm3P62311 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC11.9□□□□□ -0.5
Lsm3P62311 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Lsm3P62311 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm3P62311 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Lsm3P62311 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm3P62311 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Lsm3P62311 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Lsm3P62311 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Lsm3P62311 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Lsm3P62311 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm3P62311 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.9□□□□□ -0.5
Lsm3P62311 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm3P62311 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Lsm3P62311 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm3P62311 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm3P62311 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm3P62311 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Lsm3P62311 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Lsm3P62311 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Lsm3P62311 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Lsm3P62311 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Lsm3P62311 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.89□□□□□ -0.51
Lsm3P62311 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Lsm3P62311 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.89□□□□□ -0.51
Lsm3P62311 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.89□□□□□ -0.51
Lsm3P62311 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Mir7221-201ENSMUST00000184009 72 ntBASIC11.89□□□□□ -0.51
Lsm3P62311 Gm17968-201ENSMUST00000194902 784 ntBASIC11.89□□□□□ -0.51
Lsm3P62311 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.89□□□□□ -0.51
Lsm3P62311 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Birc2-201ENSMUST00000054878 378 ntBASIC11.89□□□□□ -0.51
Lsm3P62311 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Lsm3P62311 Mir125a-201ENSMUST00000083545 68 ntBASIC11.89□□□□□ -0.51
Lsm3P62311 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.89□□□□□ -0.51
Lsm3P62311 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms