Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh11P55288 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh11P55288 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
Cdh11P55288 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh11P55288 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh11P55288 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh11P55288 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh11P55288 Gm12138-201ENSMUST00000122180 951 ntBASIC11.96□□□□□ -0.49
Cdh11P55288 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh11P55288 Gm5354-201ENSMUST00000182417 973 ntBASIC11.96□□□□□ -0.49
Cdh11P55288 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.96□□□□□ -0.49
Cdh11P55288 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh11P55288 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.96□□□□□ -0.49
Cdh11P55288 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.96□□□□□ -0.49
Cdh11P55288 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.96□□□□□ -0.49
Cdh11P55288 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.96□□□□□ -0.49
Cdh11P55288 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh11P55288 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.96□□□□□ -0.49
Cdh11P55288 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh11P55288 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh11P55288 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Cdh11P55288 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdh11P55288 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdh11P55288 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdh11P55288 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdh11P55288 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdh11P55288 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Cdh11P55288 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Cdh11P55288 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Cdh11P55288 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Cdh11P55288 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.96□□□□□ -0.5
Cdh11P55288 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.96□□□□□ -0.5
Cdh11P55288 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh11P55288 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.95□□□□□ -0.5
Cdh11P55288 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.95□□□□□ -0.5
Cdh11P55288 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh11P55288 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh11P55288 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh11P55288 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cdh11P55288 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh11P55288 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh11P55288 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cdh11P55288 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh11P55288 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh11P55288 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh11P55288 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh11P55288 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Cdh11P55288 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh11P55288 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh11P55288 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh11P55288 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh11P55288 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh11P55288 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Cdh11P55288 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh11P55288 Gm11918-201ENSMUST00000121660 179 ntBASIC11.95□□□□□ -0.5
Cdh11P55288 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.95□□□□□ -0.5
Cdh11P55288 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.95□□□□□ -0.5
Cdh11P55288 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh11P55288 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.95□□□□□ -0.5
Cdh11P55288 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.95□□□□□ -0.5
Cdh11P55288 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh11P55288 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.95□□□□□ -0.5
Cdh11P55288 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Cdh11P55288 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh11P55288 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.95□□□□□ -0.5
Cdh11P55288 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh11P55288 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Cdh11P55288 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh11P55288 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh11P55288 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh11P55288 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.95□□□□□ -0.5
Cdh11P55288 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh11P55288 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.95□□□□□ -0.5
Cdh11P55288 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh11P55288 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh11P55288 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh11P55288 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh11P55288 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh11P55288 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cdh11P55288 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh11P55288 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh11P55288 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cdh11P55288 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh11P55288 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh11P55288 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Cdh11P55288 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh11P55288 Mir874-201ENSMUST00000104769 76 ntBASIC11.94□□□□□ -0.5
Cdh11P55288 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh11P55288 Gm6912-201ENSMUST00000117218 544 ntBASIC11.94□□□□□ -0.5
Cdh11P55288 Gm15678-201ENSMUST00000117573 960 ntBASIC11.94□□□□□ -0.5
Cdh11P55288 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh11P55288 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.94□□□□□ -0.5
Cdh11P55288 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.94□□□□□ -0.5
Cdh11P55288 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.94□□□□□ -0.5
Cdh11P55288 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh11P55288 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.94□□□□□ -0.5
Cdh11P55288 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh11P55288 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh11P55288 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh11P55288 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms