Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox3P53784 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox3P53784 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sox3P53784 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Sox3P53784 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox3P53784 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox3P53784 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.58□□□□□ -0.4
Sox3P53784 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Sox3P53784 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox3P53784 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sox3P53784 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox3P53784 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sox3P53784 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.58□□□□□ -0.4
Sox3P53784 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Sox3P53784 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.58□□□□□ -0.4
Sox3P53784 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.58□□□□□ -0.4
Sox3P53784 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox3P53784 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox3P53784 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox3P53784 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Sox3P53784 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox3P53784 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox3P53784 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox3P53784 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.57□□□□□ -0.4
Sox3P53784 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.57□□□□□ -0.4
Sox3P53784 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox3P53784 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox3P53784 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox3P53784 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox3P53784 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
Sox3P53784 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox3P53784 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Sox3P53784 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Sox3P53784 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox3P53784 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox3P53784 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.57□□□□□ -0.4
Sox3P53784 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.57□□□□□ -0.4
Sox3P53784 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox3P53784 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox3P53784 Gm22902-201ENSMUST00000158488 302 ntBASIC12.57□□□□□ -0.4
Sox3P53784 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox3P53784 Gm27682-201ENSMUST00000183930 110 ntBASIC12.57□□□□□ -0.4
Sox3P53784 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox3P53784 Olfr284-202ENSMUST00000206647 966 ntBASIC12.57□□□□□ -0.4
Sox3P53784 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox3P53784 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox3P53784 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox3P53784 Snora73a-201ENSMUST00000082453 205 ntBASIC12.57□□□□□ -0.4
Sox3P53784 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox3P53784 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox3P53784 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Sox3P53784 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox3P53784 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.57□□□□□ -0.4
Sox3P53784 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.57□□□□□ -0.4
Sox3P53784 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox3P53784 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox3P53784 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox3P53784 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox3P53784 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox3P53784 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.57□□□□□ -0.4
Sox3P53784 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Sox3P53784 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Sox3P53784 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox3P53784 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox3P53784 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox3P53784 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.56□□□□□ -0.4
Sox3P53784 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.56□□□□□ -0.4
Sox3P53784 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox3P53784 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.56□□□□□ -0.4
Sox3P53784 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox3P53784 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox3P53784 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox3P53784 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.56□□□□□ -0.4
Sox3P53784 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox3P53784 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox3P53784 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.56□□□□□ -0.4
Sox3P53784 Gm43133-201ENSMUST00000197472 463 ntBASIC12.56□□□□□ -0.4
Sox3P53784 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.56□□□□□ -0.4
Sox3P53784 Gm5363-201ENSMUST00000211927 938 ntBASIC12.56□□□□□ -0.4
Sox3P53784 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.56□□□□□ -0.4
Sox3P53784 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox3P53784 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox3P53784 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox3P53784 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox3P53784 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox3P53784 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox3P53784 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.56□□□□□ -0.4
Sox3P53784 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox3P53784 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox3P53784 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox3P53784 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox3P53784 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox3P53784 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox3P53784 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox3P53784 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Sox3P53784 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox3P53784 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox3P53784 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox3P53784 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox3P53784 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms