Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prox1P48437 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.6□□□□□ -0.39
Prox1P48437 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prox1P48437 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prox1P48437 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prox1P48437 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prox1P48437 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Prox1P48437 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Prox1P48437 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.59□□□□□ -0.39
Prox1P48437 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.59□□□□□ -0.39
Prox1P48437 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 Gm15693-201ENSMUST00000120470 637 ntBASIC12.59□□□□□ -0.39
Prox1P48437 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 Gm24420-201ENSMUST00000176676 59 ntBASIC12.59□□□□□ -0.39
Prox1P48437 Gm27430-201ENSMUST00000184585 107 ntBASIC12.59□□□□□ -0.39
Prox1P48437 Gm44333-201ENSMUST00000197168 107 ntBASIC12.59□□□□□ -0.39
Prox1P48437 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Prox1P48437 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Prox1P48437 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.59□□□□□ -0.39
Prox1P48437 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prox1P48437 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Prox1P48437 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.58□□□□□ -0.39
Prox1P48437 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Prox1P48437 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Prox1P48437 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Prox1P48437 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Prox1P48437 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prox1P48437 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Prox1P48437 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prox1P48437 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prox1P48437 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prox1P48437 Mir874-201ENSMUST00000104769 76 ntBASIC12.58□□□□□ -0.4
Prox1P48437 Gm15770-201ENSMUST00000117498 584 ntBASIC12.58□□□□□ -0.4
Prox1P48437 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Prox1P48437 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prox1P48437 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.58□□□□□ -0.4
Prox1P48437 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prox1P48437 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Prox1P48437 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Prox1P48437 Gm25144-201ENSMUST00000179561 110 ntBASIC12.58□□□□□ -0.4
Prox1P48437 Gm25352-201ENSMUST00000179815 110 ntBASIC12.58□□□□□ -0.4
Prox1P48437 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.58□□□□□ -0.4
Prox1P48437 Gm27533-201ENSMUST00000183800 152 ntBASIC12.58□□□□□ -0.4
Prox1P48437 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Prox1P48437 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Prox1P48437 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Prox1P48437 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Prox1P48437 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prox1P48437 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Prox1P48437 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prox1P48437 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prox1P48437 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Prox1P48437 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prox1P48437 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prox1P48437 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Prox1P48437 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prox1P48437 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.58□□□□□ -0.4
Prox1P48437 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.58□□□□□ -0.4
Prox1P48437 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Prox1P48437 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prox1P48437 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Prox1P48437 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prox1P48437 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Prox1P48437 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Prox1P48437 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Prox1P48437 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.57□□□□□ -0.4
Prox1P48437 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
Prox1P48437 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Prox1P48437 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prox1P48437 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prox1P48437 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms