Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col8a2P25318 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col8a2P25318 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col8a2P25318 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Col8a2P25318 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col8a2P25318 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.93□□□□□ -0.66
Col8a2P25318 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.93□□□□□ -0.66
Col8a2P25318 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.93□□□□□ -0.66
Col8a2P25318 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.93□□□□□ -0.66
Col8a2P25318 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Col8a2P25318 Gm27516-201ENSMUST00000184237 98 ntBASIC10.93□□□□□ -0.66
Col8a2P25318 Mir8109-201ENSMUST00000184375 117 ntBASIC10.93□□□□□ -0.66
Col8a2P25318 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col8a2P25318 Gm6458-201ENSMUST00000211573 635 ntBASIC10.93□□□□□ -0.66
Col8a2P25318 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.93□□□□□ -0.66
Col8a2P25318 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.93□□□□□ -0.66
Col8a2P25318 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.93□□□□□ -0.66
Col8a2P25318 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.93□□□□□ -0.66
Col8a2P25318 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.93□□□□□ -0.66
Col8a2P25318 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col8a2P25318 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col8a2P25318 Gm16372-201ENSMUST00000073088 450 ntBASIC10.93□□□□□ -0.66
Col8a2P25318 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Col8a2P25318 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col8a2P25318 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col8a2P25318 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col8a2P25318 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Col8a2P25318 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.93□□□□□ -0.66
Col8a2P25318 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col8a2P25318 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Col8a2P25318 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col8a2P25318 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.93□□□□□ -0.66
Col8a2P25318 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col8a2P25318 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col8a2P25318 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col8a2P25318 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col8a2P25318 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col8a2P25318 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col8a2P25318 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC10.92□□□□□ -0.66
Col8a2P25318 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Col8a2P25318 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Col8a2P25318 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Col8a2P25318 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Col8a2P25318 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.92□□□□□ -0.66
Col8a2P25318 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.92□□□□□ -0.66
Col8a2P25318 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.92□□□□□ -0.66
Col8a2P25318 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Gm19184-201ENSMUST00000196798 928 ntBASIC10.92□□□□□ -0.66
Col8a2P25318 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Col8a2P25318 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC10.92□□□□□ -0.66
Col8a2P25318 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Col8a2P25318 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Col8a2P25318 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Col8a2P25318 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.92□□□□□ -0.66
Col8a2P25318 Gm44891-201ENSMUST00000208817 2223 ntBASIC10.92□□□□□ -0.66
Col8a2P25318 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Col8a2P25318 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col8a2P25318 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a2P25318 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a2P25318 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a2P25318 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.91□□□□□ -0.66
Col8a2P25318 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Col8a2P25318 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a2P25318 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Col8a2P25318 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a2P25318 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Col8a2P25318 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a2P25318 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a2P25318 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a2P25318 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms