Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Ccl3P10855 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ccl3P10855 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccl3P10855 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Ccl3P10855 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.52□□□□□ -0.56
Ccl3P10855 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.52□□□□□ -0.56
Ccl3P10855 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ccl3P10855 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ccl3P10855 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ccl3P10855 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl3P10855 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl3P10855 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl3P10855 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.52□□□□□ -0.57
Ccl3P10855 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Ccl3P10855 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Ccl3P10855 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl3P10855 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Ccl3P10855 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl3P10855 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl3P10855 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.52□□□□□ -0.57
Ccl3P10855 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.52□□□□□ -0.57
Ccl3P10855 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Ccl3P10855 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Ccl3P10855 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Ccl3P10855 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.52□□□□□ -0.57
Ccl3P10855 Gm3096-201ENSMUST00000185770 364 ntBASIC11.52□□□□□ -0.57
Ccl3P10855 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.52□□□□□ -0.57
Ccl3P10855 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl3P10855 Gm38092-201ENSMUST00000195600 653 ntBASIC11.52□□□□□ -0.57
Ccl3P10855 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.52□□□□□ -0.57
Ccl3P10855 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.52□□□□□ -0.57
Ccl3P10855 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.52□□□□□ -0.57
Ccl3P10855 Gm19208-201ENSMUST00000213861 912 ntBASIC11.52□□□□□ -0.57
Ccl3P10855 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.52□□□□□ -0.57
Ccl3P10855 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl3P10855 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl3P10855 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl3P10855 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl3P10855 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl3P10855 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl3P10855 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Ccl3P10855 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl3P10855 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl3P10855 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.52□□□□□ -0.57
Ccl3P10855 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl3P10855 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl3P10855 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl3P10855 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl3P10855 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.52□□□□□ -0.57
Ccl3P10855 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccl3P10855 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.51□□□□□ -0.57
Ccl3P10855 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ccl3P10855 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.51□□□□□ -0.57
Ccl3P10855 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.51□□□□□ -0.57
Ccl3P10855 Gm14109-201ENSMUST00000118814 309 ntBASIC11.51□□□□□ -0.57
Ccl3P10855 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 B9d1os-201ENSMUST00000137010 674 ntBASIC11.51□□□□□ -0.57
Ccl3P10855 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Mir5120-201ENSMUST00000175020 78 ntBASIC11.51□□□□□ -0.57
Ccl3P10855 Mir7221-201ENSMUST00000184009 72 ntBASIC11.51□□□□□ -0.57
Ccl3P10855 Gm8885-201ENSMUST00000189382 598 ntBASIC11.51□□□□□ -0.57
Ccl3P10855 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.51□□□□□ -0.57
Ccl3P10855 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Ccl3P10855 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.51□□□□□ -0.57
Ccl3P10855 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.51□□□□□ -0.57
Ccl3P10855 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Ccl3P10855 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ccl3P10855 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccl3P10855 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms