Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Gm7666-201ENSMUST00000146631 819 ntBASIC13.09□□□□□ -0.31
Hoxb3P09026 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxb3P09026 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.09□□□□□ -0.31
Hoxb3P09026 Gm25261-201ENSMUST00000157416 134 ntBASIC13.09□□□□□ -0.31
Hoxb3P09026 Gm7029-201ENSMUST00000173226 450 ntBASIC13.09□□□□□ -0.31
Hoxb3P09026 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxb3P09026 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC13.09□□□□□ -0.31
Hoxb3P09026 Mir6923-201ENSMUST00000184592 72 ntBASIC13.09□□□□□ -0.31
Hoxb3P09026 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Hoxb3P09026 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.09□□□□□ -0.31
Hoxb3P09026 Gm37604-201ENSMUST00000191749 1272 ntBASIC13.09□□□□□ -0.31
Hoxb3P09026 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.09□□□□□ -0.31
Hoxb3P09026 Gm8679-201ENSMUST00000210651 1036 ntBASIC13.09□□□□□ -0.31
Hoxb3P09026 Gm45856-201ENSMUST00000212752 416 ntBASIC13.09□□□□□ -0.31
Hoxb3P09026 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.09□□□□□ -0.31
Hoxb3P09026 Gm7046-201ENSMUST00000221351 977 ntBASIC13.09□□□□□ -0.31
Hoxb3P09026 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.09□□□□□ -0.31
Hoxb3P09026 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxb3P09026 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxb3P09026 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Hoxb3P09026 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxb3P09026 Gm10268-201ENSMUST00000085340 555 ntBASIC13.09□□□□□ -0.31
Hoxb3P09026 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxb3P09026 Gm8325-201ENSMUST00000099086 453 ntBASIC13.09□□□□□ -0.31
Hoxb3P09026 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Hoxb3P09026 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxb3P09026 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxb3P09026 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxb3P09026 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxb3P09026 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxb3P09026 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.08□□□□□ -0.31
Hoxb3P09026 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Hoxb3P09026 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.08□□□□□ -0.31
Hoxb3P09026 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Hoxb3P09026 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.08□□□□□ -0.31
Hoxb3P09026 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Hoxb3P09026 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxb3P09026 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxb3P09026 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxb3P09026 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxb3P09026 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxb3P09026 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Hoxb3P09026 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxb3P09026 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxb3P09026 Gm22709-201ENSMUST00000116893 111 ntBASIC13.08□□□□□ -0.32
Hoxb3P09026 Gm14659-201ENSMUST00000117667 843 ntBASIC13.08□□□□□ -0.32
Hoxb3P09026 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
Hoxb3P09026 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxb3P09026 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Hoxb3P09026 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.08□□□□□ -0.32
Hoxb3P09026 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxb3P09026 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.08□□□□□ -0.32
Hoxb3P09026 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Hoxb3P09026 Gm6458-201ENSMUST00000211573 635 ntBASIC13.08□□□□□ -0.32
Hoxb3P09026 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxb3P09026 AC126799.1-201ENSMUST00000221976 246 ntBASIC13.08□□□□□ -0.32
Hoxb3P09026 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxb3P09026 Gm16372-201ENSMUST00000073088 450 ntBASIC13.08□□□□□ -0.32
Hoxb3P09026 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxb3P09026 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxb3P09026 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Hoxb3P09026 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxb3P09026 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Hoxb3P09026 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxb3P09026 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxb3P09026 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxb3P09026 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxb3P09026 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxb3P09026 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxb3P09026 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxb3P09026 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxb3P09026 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxb3P09026 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxb3P09026 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Hoxb3P09026 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxb3P09026 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxb3P09026 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxb3P09026 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxb3P09026 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Hoxb3P09026 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxb3P09026 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxb3P09026 Gm43435-201ENSMUST00000199996 1438 ntBASIC13.07□□□□□ -0.32
Hoxb3P09026 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.07□□□□□ -0.32
Hoxb3P09026 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxb3P09026 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.07□□□□□ -0.32
Hoxb3P09026 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxb3P09026 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Hoxb3P09026 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxb3P09026 Mir686-201ENSMUST00000102174 109 ntBASIC13.07□□□□□ -0.32
Hoxb3P09026 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Hoxb3P09026 Gm13888-201ENSMUST00000119148 422 ntBASIC13.07□□□□□ -0.32
Hoxb3P09026 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.07□□□□□ -0.32
Hoxb3P09026 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Hoxb3P09026 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Hoxb3P09026 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxb3P09026 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxb3P09026 Gm25927-201ENSMUST00000175058 117 ntBASIC13.07□□□□□ -0.32
Hoxb3P09026 Gm3671-201ENSMUST00000182463 1007 ntBASIC13.07□□□□□ -0.32
Hoxb3P09026 Gm43752-201ENSMUST00000198475 697 ntBASIC13.07□□□□□ -0.32
Hoxb3P09026 Gm43778-201ENSMUST00000199438 199 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms