Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa4P06798 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa4P06798 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa4P06798 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa4P06798 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa4P06798 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa4P06798 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa4P06798 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa4P06798 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.89□□□□□ -0.35
Hoxa4P06798 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa4P06798 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxa4P06798 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.88□□□□□ -0.35
Hoxa4P06798 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxa4P06798 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxa4P06798 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxa4P06798 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Hoxa4P06798 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxa4P06798 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxa4P06798 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxa4P06798 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.88□□□□□ -0.35
Hoxa4P06798 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxa4P06798 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Hoxa4P06798 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxa4P06798 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxa4P06798 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxa4P06798 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxa4P06798 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxa4P06798 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Hoxa4P06798 Gm12363-201ENSMUST00000122250 668 ntBASIC12.88□□□□□ -0.35
Hoxa4P06798 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxa4P06798 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxa4P06798 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxa4P06798 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.88□□□□□ -0.35
Hoxa4P06798 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxa4P06798 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.88□□□□□ -0.35
Hoxa4P06798 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.88□□□□□ -0.35
Hoxa4P06798 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.88□□□□□ -0.35
Hoxa4P06798 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Hoxa4P06798 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxa4P06798 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxa4P06798 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Hoxa4P06798 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxa4P06798 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxa4P06798 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.88□□□□□ -0.35
Hoxa4P06798 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Hoxa4P06798 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxa4P06798 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.88□□□□□ -0.35
Hoxa4P06798 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.88□□□□□ -0.35
Hoxa4P06798 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxa4P06798 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Hoxa4P06798 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxa4P06798 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxa4P06798 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Hoxa4P06798 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Hoxa4P06798 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Hoxa4P06798 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxa4P06798 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxa4P06798 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxa4P06798 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxa4P06798 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxa4P06798 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Hoxa4P06798 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.88□□□□□ -0.35
Hoxa4P06798 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hoxa4P06798 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.87□□□□□ -0.35
Hoxa4P06798 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxa4P06798 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Hoxa4P06798 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxa4P06798 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxa4P06798 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.87□□□□□ -0.35
Hoxa4P06798 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxa4P06798 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.87□□□□□ -0.35
Hoxa4P06798 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxa4P06798 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.87□□□□□ -0.35
Hoxa4P06798 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxa4P06798 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Hoxa4P06798 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.87□□□□□ -0.35
Hoxa4P06798 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxa4P06798 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxa4P06798 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.87□□□□□ -0.35
Hoxa4P06798 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Hoxa4P06798 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxa4P06798 Gm23931-201ENSMUST00000103842 109 ntBASIC12.87□□□□□ -0.35
Hoxa4P06798 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.87□□□□□ -0.35
Hoxa4P06798 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxa4P06798 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Hoxa4P06798 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.87□□□□□ -0.35
Hoxa4P06798 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.87□□□□□ -0.35
Hoxa4P06798 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.87□□□□□ -0.35
Hoxa4P06798 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxa4P06798 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxa4P06798 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Hoxa4P06798 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxa4P06798 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Hoxa4P06798 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxa4P06798 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxa4P06798 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxa4P06798 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hoxa4P06798 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
Hoxa4P06798 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.87□□□□□ -0.35
Hoxa4P06798 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms