Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.3■□□□□ 0.04
Usp42B2RQC2 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp42B2RQC2 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp42B2RQC2 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp42B2RQC2 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Usp42B2RQC2 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp42B2RQC2 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp42B2RQC2 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp42B2RQC2 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp42B2RQC2 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp42B2RQC2 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp42B2RQC2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp42B2RQC2 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Usp42B2RQC2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp42B2RQC2 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Usp42B2RQC2 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.3■□□□□ 0.04
Usp42B2RQC2 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp42B2RQC2 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp42B2RQC2 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp42B2RQC2 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp42B2RQC2 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp42B2RQC2 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp42B2RQC2 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.29■□□□□ 0.04
Usp42B2RQC2 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp42B2RQC2 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp42B2RQC2 Gm13829-201ENSMUST00000119600 138 ntBASIC15.29■□□□□ 0.04
Usp42B2RQC2 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Usp42B2RQC2 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Usp42B2RQC2 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC15.29■□□□□ 0.04
Usp42B2RQC2 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC15.29■□□□□ 0.04
Usp42B2RQC2 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.29■□□□□ 0.04
Usp42B2RQC2 Gm26927-201ENSMUST00000182385 965 ntBASIC15.29■□□□□ 0.04
Usp42B2RQC2 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Usp42B2RQC2 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.29■□□□□ 0.04
Usp42B2RQC2 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.29■□□□□ 0.04
Usp42B2RQC2 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.29■□□□□ 0.04
Usp42B2RQC2 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp42B2RQC2 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Usp42B2RQC2 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Usp42B2RQC2 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp42B2RQC2 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
Usp42B2RQC2 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp42B2RQC2 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp42B2RQC2 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.29■□□□□ 0.04
Usp42B2RQC2 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp42B2RQC2 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.29■□□□□ 0.04
Usp42B2RQC2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp42B2RQC2 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Usp42B2RQC2 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp42B2RQC2 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Usp42B2RQC2 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Usp42B2RQC2 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp42B2RQC2 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Usp42B2RQC2 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp42B2RQC2 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp42B2RQC2 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp42B2RQC2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp42B2RQC2 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp42B2RQC2 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp42B2RQC2 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Usp42B2RQC2 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Usp42B2RQC2 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Usp42B2RQC2 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.28■□□□□ 0.04
Usp42B2RQC2 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp42B2RQC2 Snord83b-201ENSMUST00000104546 94 ntBASIC15.28■□□□□ 0.04
Usp42B2RQC2 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
Usp42B2RQC2 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp42B2RQC2 Gm12291-201ENSMUST00000121627 311 ntBASIC15.28■□□□□ 0.04
Usp42B2RQC2 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Usp42B2RQC2 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.28■□□□□ 0.04
Usp42B2RQC2 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Usp42B2RQC2 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.28■□□□□ 0.04
Usp42B2RQC2 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC15.28■□□□□ 0.04
Usp42B2RQC2 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.28■□□□□ 0.04
Usp42B2RQC2 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Usp42B2RQC2 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp42B2RQC2 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp42B2RQC2 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.28■□□□□ 0.04
Usp42B2RQC2 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp42B2RQC2 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp42B2RQC2 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp42B2RQC2 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.28■□□□□ 0.04
Usp42B2RQC2 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp42B2RQC2 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Usp42B2RQC2 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp42B2RQC2 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp42B2RQC2 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC15.27■□□□□ 0.04
Usp42B2RQC2 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp42B2RQC2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp42B2RQC2 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Usp42B2RQC2 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp42B2RQC2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp42B2RQC2 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Usp42B2RQC2 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Usp42B2RQC2 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Usp42B2RQC2 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Usp42B2RQC2 Gm12363-201ENSMUST00000122250 668 ntBASIC15.27■□□□□ 0.04
Usp42B2RQC2 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.27■□□□□ 0.04
Usp42B2RQC2 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC15.27■□□□□ 0.04
Usp42B2RQC2 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms