Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a4A2AX52 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a4A2AX52 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Col6a4A2AX52 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a4A2AX52 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a4A2AX52 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Col6a4A2AX52 Gm22121-201ENSMUST00000175148 54 ntBASIC11.05□□□□□ -0.64
Col6a4A2AX52 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Col6a4A2AX52 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a4A2AX52 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.05□□□□□ -0.64
Col6a4A2AX52 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.05□□□□□ -0.64
Col6a4A2AX52 Gm13097-201ENSMUST00000210722 397 ntBASIC11.05□□□□□ -0.64
Col6a4A2AX52 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.05□□□□□ -0.64
Col6a4A2AX52 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a4A2AX52 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.05□□□□□ -0.64
Col6a4A2AX52 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a4A2AX52 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.05□□□□□ -0.64
Col6a4A2AX52 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a4A2AX52 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Col6a4A2AX52 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Col6a4A2AX52 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Col6a4A2AX52 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a4A2AX52 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.05□□□□□ -0.64
Col6a4A2AX52 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.05□□□□□ -0.64
Col6a4A2AX52 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a4A2AX52 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Col6a4A2AX52 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a4A2AX52 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a4A2AX52 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.05□□□□□ -0.64
Col6a4A2AX52 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Col6a4A2AX52 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a4A2AX52 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a4A2AX52 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a4A2AX52 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.04□□□□□ -0.64
Col6a4A2AX52 Gm18584-201ENSMUST00000203098 964 ntBASIC11.04□□□□□ -0.64
Col6a4A2AX52 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Gm44551-201ENSMUST00000208804 171 ntBASIC11.04□□□□□ -0.64
Col6a4A2AX52 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.04□□□□□ -0.64
Col6a4A2AX52 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Gm16202-201ENSMUST00000117532 544 ntBASIC11.04□□□□□ -0.64
Col6a4A2AX52 Gm11331-201ENSMUST00000119764 288 ntBASIC11.04□□□□□ -0.64
Col6a4A2AX52 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.04□□□□□ -0.64
Col6a4A2AX52 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.04□□□□□ -0.64
Col6a4A2AX52 Gm44126-201ENSMUST00000204831 514 ntBASIC11.04□□□□□ -0.64
Col6a4A2AX52 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a4A2AX52 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Col6a4A2AX52 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a4A2AX52 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Gm8566-201ENSMUST00000120174 465 ntBASIC11.03□□□□□ -0.64
Col6a4A2AX52 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Gm13813-201ENSMUST00000120998 787 ntBASIC11.03□□□□□ -0.64
Col6a4A2AX52 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.03□□□□□ -0.64
Col6a4A2AX52 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Gm45118-201ENSMUST00000208928 825 ntBASIC11.03□□□□□ -0.64
Col6a4A2AX52 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms