Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Gm13223-201ENSMUST00000118609 747 ntBASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Gm27702-201ENSMUST00000184512 56 ntBASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 AC139580.1-202ENSMUST00000223574 928 ntBASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trbv29A0A0G2LB96 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 Gm26464-201ENSMUST00000157094 305 ntBASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 AC132104.2-201ENSMUST00000215011 266 ntBASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trbv29A0A0G2LB96 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms