Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5-4A0A075B652 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11□□□□□ -0.65
Trav5-4A0A075B652 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Gm38355-201ENSMUST00000192514 1570 ntBASIC11□□□□□ -0.65
Trav5-4A0A075B652 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav5-4A0A075B652 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Gm13886-201ENSMUST00000117876 1183 ntBASIC11□□□□□ -0.65
Trav5-4A0A075B652 Gm15920-201ENSMUST00000118998 402 ntBASIC11□□□□□ -0.65
Trav5-4A0A075B652 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Gm14719-201ENSMUST00000121891 340 ntBASIC11□□□□□ -0.65
Trav5-4A0A075B652 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Trav5-4A0A075B652 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Gm43094-201ENSMUST00000196549 921 ntBASIC11□□□□□ -0.65
Trav5-4A0A075B652 Gm5279-201ENSMUST00000199575 745 ntBASIC11□□□□□ -0.65
Trav5-4A0A075B652 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11□□□□□ -0.65
Trav5-4A0A075B652 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav5-4A0A075B652 AC132863.2-201ENSMUST00000226643 799 ntBASIC11□□□□□ -0.65
Trav5-4A0A075B652 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Gm43423-201ENSMUST00000198390 2094 ntBASIC11□□□□□ -0.65
Trav5-4A0A075B652 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5-4A0A075B652 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5-4A0A075B652 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trav5-4A0A075B652 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Gm12537-201ENSMUST00000119266 1002 ntBASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Gm12070-201ENSMUST00000119551 1002 ntBASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Gm12671-201ENSMUST00000119978 1002 ntBASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Gm13292-201ENSMUST00000120014 1000 ntBASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Gm12403-201ENSMUST00000121384 959 ntBASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Gm10359-201ENSMUST00000180167 1002 ntBASIC10.99□□□□□ -0.65
Trav5-4A0A075B652 Gm12033-201ENSMUST00000180654 1002 ntBASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms